FMO14021.5prime Sequence
609 bp (609 high quality bases) assembled on 2014-01-10
> FMO14021.5prime
TCAGTCGACATGCGTAAGGAGGTCATCCGAAGCTGCTGTGCCGTGGCCTT
CATTTTGGTGGCTCTCATGCCCTTGACTGGAGCGTGGCGCTCTTTCAAGG
TCATCCTCACGAGCATTGACTTTGAGGCCAACGACAAGTTCCTGGACCTT
AAGGTCGATCTGCAAAACGATTCGGGCGAGTCAAATCTGAGCATCGATAT
AAAGACGCACCAGGACATAGAGGACGTTCAGCTGGTGGTAGACTTTGGTT
TGGAGACGGACAAGGGCAACTACTCTACCCTGATAAACCGTACGCTCAAC
TTCTGCAAGCTGATGAAGCAGCGCAACTCGGATCCGCTGGTGCGCGCGAT
CTACGAGGACCTTCTCAAGCACGGCACCCTCTTCAAGGAGTGCCCAATCC
GGAGCGGCACCTACAGCCTAACCAACTACAATGTGGACGAGGAGATGCTG
CCCAGCTTCCTGCCGGAGGCTAAGTTCCGCTTCGGCATGAAAATTTCGAC
GGACAAGGGCGGCATGATCGTACGGTCGACCATCTTCGGCCGCATCGACA
AGTCCAAAGGCTTCGACAACCTGAAGCGGTTCAGTCTCGGCGCAAGCTTT
CTAGACCAT
FMO14021.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14455-RB | 663 | CG14455-RB | 5..586 | 10..591 | 2910 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22686437..22686941 | 591..87 | 2525 | 100 | Minus |
| 3L | 28110227 | 3L | 22687006..22687083 | 87..10 | 390 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:05:08 has no hits.
FMO14021.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:22:31 Download gff for
FMO14021.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14455-RB | 1..590 | 6..596 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:58:48 Download gff for
FMO14021.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14455-RB | 1..590 | 6..596 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:58:48 Download gff for
FMO14021.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22686433..22686940 | 88..596 | 99 | <- | Minus |
| 3L | 22687006..22687089 | 1..87 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:22:31 Download gff for
FMO14021.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22679533..22680040 | 88..596 | 99 | <- | Minus |
| arm_3L | 22680106..22680189 | 1..87 | 94 | | Minus |
