FMO14022.5prime Sequence
333 bp (333 high quality bases) assembled on 2014-01-10
> FMO14022.5prime
TCAGTCGACATGTCCGCGACGAGCCTTGTAACCATTAAGTCGATCCCCTC
AGCGGGAGATGTCCTGCGGGGTAAAAATGTACCAGTTCACCGCCTCAACG
CGAAGTTTGTGGCCAAGGCCCAGGAGAAGGCTAAGAAAGTGGAGGAATTC
CTGACTAGGACGAAGACCACTTCGTTGGTTTCCTTGTCAGGACTTGCTTC
CCGATATGAGTTCCATCGTCTCCAGGAGCTCGACGAGTGGTATGAGCCAA
GGATCAAGTTCCACGACGAGGCCGATGCCAGTTTGCATCCCAGCTACGAT
ATAAAGCACTTTCAGGCAAGCTTTCTAGACCAT
FMO14022.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:04:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11286-RB | 838 | CG11286-RB | 55..362 | 8..315 | 1540 | 100 | Plus |
| CG11286-RA | 779 | CG11286-RA | 55..362 | 8..315 | 1540 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:04:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7771395..7771702 | 315..8 | 1540 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:04:40 has no hits.
FMO14022.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:22:18 Download gff for
FMO14022.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11286-RA | 49..371 | 1..323 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:58:28 Download gff for
FMO14022.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11286-RA | 49..371 | 1..323 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:58:28 Download gff for
FMO14022.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7771395..7771705 | 1..315 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:22:18 Download gff for
FMO14022.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3597117..3597427 | 1..315 | 98 | | Minus |
