FMO14024.5prime Sequence
1109 bp (991 high quality bases) assembled on 2014-01-10
> FMO14024.5prime
TCAGTCGACATGCTGCAGTTGCTCTGTCGGCGAAAGGTGGACGTTGAACT
GGTGAAGACCAACGATTCCCGTTGGGAGGAGTTCATACTGAATATCTCAC
AGCCCTGCAACTCAATGGTTATTCACTGTCGTTTTGGCGCCGATGATTAC
GAATGTGCACGTTTATTTCATCCCATCGTGACCGATGAAGGTCTGTGCTG
TGTTTTTAATATGCTACATCCCAGGTTTATGTACCGGAAAAGAGTTCCCT
ATTCGCATCGGAATATAAGTCTGCCAGAGGGATTCCATGCAGTCAATTGG
CATGCCGAGTTGGGCTATCGCAAGCGAGGCTTTCAGCCGGACGGTGATAA
TCCTCTTTACCCTCGACGAGCCCAAGGAACAGGGGAGTCATTGGGACTAT
CGCTGACCCTGGATGTCCAGGCGGATGCCTACTACTGCTCCTCATCCAGC
AGCATTGGCTTCAAGATCGCCCTGCATAGCCCGAATGAATCGCCGAATGT
CCGGGAGACCGGAGTCCTATTGGCACCCGGAATGGAGACCAAGTTGCGCA
TAGATCCGTCGAAAATTCTTACCGAGAAGCATCTACGCAATGTGGACCGT
CGGAGCAGGCGTTGTTTATTCCACAATGAGCTAAAACTTCGCTGGTTCGC
CCACTACACCCAGAGAAATTGTGTGGCCGAGTGCCTTTCCGGCTGGCTAA
TCCGCCACTGCGGCTGTGTGACCTTCTATATGCCCAGATTGAATGCGAAC
GATACTATATGCCCACTGCACAAGAGGGAATGTGTGGAGCTTATTCGATT
TAGAACCATAATAGCGATGGAATCATGTCTTGACGAGTGCCTGCCATCGT
GTTTCGATCTCAGTTTCAGCGCATTGCCTATTCGACGAGAATATCGCTGG
ACGGCTTTAGGAGACACCTTCGAATGTGATTGGAACTTTACCGATGCCTA
TGTGAGCGCAGCGTACCGTGTGAATATGTATTTAAGACCCAACATTCCGA
GCAACACGACGAATCAAAGCTTTCCGAATTTCATCTGCGTGGAAGTCTTA
TGGAATATTTCCTCGCTTCACTTCTATCCATTGCGAGGTGGTAATTGGCT
GTATTCGCC
FMO14024.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:04:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ppk8-RH | 1910 | CG32792-RH | 412..1508 | 10..1084 | 4825 | 97.3 | Plus |
| ppk8-RG | 1822 | CG32792-RG | 324..1420 | 10..1084 | 4825 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:04:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 3570662..3571435 | 239..1004 | 3480 | 98.4 | Plus |
| X | 23542271 | X | 3570232..3570380 | 94..242 | 745 | 100 | Plus |
| X | 23542271 | X | 3569975..3570058 | 10..93 | 420 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:04:43 has no hits.
FMO14024.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:22:19 Download gff for
FMO14024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32792-RG | 319..1326 | 1..1004 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:58:30 Download gff for
FMO14024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ppk8-RG | 319..1326 | 1..1004 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:58:30 Download gff for
FMO14024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 3569970..3570058 | 1..93 | 95 | -> | Plus |
| X | 3570232..3570380 | 94..242 | 100 | -> | Plus |
| X | 3570666..3571435 | 243..1004 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:22:19 Download gff for
FMO14024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 3464003..3464091 | 1..93 | 95 | -> | Plus |
| arm_X | 3464265..3464413 | 94..242 | 100 | -> | Plus |
| arm_X | 3464699..3465468 | 243..1004 | 98 | == | Plus |
