FMO14027.5prime Sequence
705 bp (705 high quality bases) assembled on 2014-01-10
> FMO14027.5prime
TCAGTCGACATGAAATCTCTGGCCGGCGATAAATTTGCTCTGTCCGAAGA
GATTGGGCCACCGCCTTGTTCTCCCAAACACCGAAAAGCAAGTGCCGTGA
GTAGGGACACGGATACAAATAACCATCATGTGGTGCCGCTGGGGATCCTC
GTGGTGCTCTGCACTGTGTATCTCATGGTAGCCGGGATGCAGCGCAACTA
CAGGCACTATTTTAAGCCGGGCGTGGCTGCCTTCGACCTGCACCATGCCC
AGCCGGAAGCCATGGCCGACGCCGAATTGGATGTCGCCGCTCCAGATGCA
TCGTGCCAGAGGTTGGACGTTTTCGGAAAGGAATCCAATCGGAATCAGGC
AGTTTCAAGAAGATCCCAAGGCAGGCCCACGAAGAGAACCAAAAACGGCA
CTGGAAATGGGGTCAGCAAGCAACCTCGTCGTTTGATAAAGTCCCCGGAG
GGGCACAAGAAGAAGGAAGTTGGCAAGAAGAGTAACACAGCGGAGCCCAT
TATTTACCTGTTCGCCCTTGTGTTTGTCTATCTGCTTCTGAAGGCCGCCT
CGGACATCAACCAGCACTACAAGTCGAACAAAGGGGACAAGCGACTGCGC
CGGTGCTCGCTGCAATCTTATGCCCAGATCCACAAGCAGGATCGCCGGTC
ATCAAAAGGTATTTCACCAAAATCTTTGCCAAAGTTTGCAAGCTTTCTAG
ACCAT
FMO14027.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8248-RB | 1369 | CG8248-RB | 279..956 | 10..687 | 3390 | 100 | Plus |
| CG8248-RA | 1372 | CG8248-RA | 279..959 | 10..687 | 3350 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8919524..8920090 | 576..10 | 2835 | 100 | Minus |
| 2R | 25286936 | 2R | 8919353..8919464 | 687..576 | 560 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:05:25 has no hits.
FMO14027.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:22:41 Download gff for
FMO14027.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8248-RB | 269..965 | 1..698 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:58:57 Download gff for
FMO14027.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8248-RB | 269..965 | 1..698 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:58:57 Download gff for
FMO14027.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8919344..8919463 | 577..698 | 95 | <- | Minus |
| 2R | 8919524..8920099 | 1..576 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:22:41 Download gff for
FMO14027.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4806849..4806968 | 577..698 | 95 | <- | Minus |
| arm_2R | 4807029..4807604 | 1..576 | 99 | | Minus |
