FMO14034.5prime Sequence
717 bp (717 high quality bases) assembled on 2014-01-10
> FMO14034.5prime
TCAGTCGACATGCAGATGCACATGGAACTCTCCTATGGCCGCGGCTACGA
TCCAATCGGGAGGCAACCACCGTCTCTTCCTCCTCCGTCGCAACAGCACT
GGTCCAGCAATGGGTTCTCCGACGACTCCGCTTCCTGCTTCCGTCGGGGA
TCCTATATTGAACTGGCCAGCGGAGCCATGCGTCGCGTGGAGGACATACG
CACCGAGGACTTCATCCAGTCGGCGCTGCGCAGTCAACTATTTGAGCTGC
GAGAGGCGACAGTAGTGAGGATAGACTGGAGTGGATGCCCCAGCCTGGTG
ACACTCACCTTCAGCTACGACACACACCACGCCAAGATGGACTTGCAGGT
GCAGCCGGGTCATCCAATGTTTGTTTACGGACAGGGCTGGGCCTCCTGCG
ATCCACAGTTGTCGCTGCAGCTGTACGAGCTCAAATGCCAGCAGCTGCAG
GTGGGCGACATATGTTTGTCGCTGGTGCCAAACGAGCAGCCCGCCGCACC
ATGTCCGCCTCAGCCGGCGCCGCCACCGCCGTGTCCGCCTCCTTCTCTGC
CCCCGTCCATGGAAATGCCAGTGCCGATGGGTTCTCCGCCTACCGGAAGC
TATGGATTTCTGCCGTTTAAGCATCCGTACGAGATGTACGCCCAAATGGC
CAGTTTTGTGGCCGTGTACACCCAGCACATGATGGGAAAGCTAAACTATG
CAAGCTTTCTAGACCAT
FMO14034.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Atx-1-RB | 890 | CG4547-RB | 47..741 | 5..699 | 3475 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6823690..6824054 | 335..699 | 1825 | 100 | Plus |
| X | 23542271 | X | 6823413..6823642 | 111..340 | 1135 | 99.6 | Plus |
| X | 23542271 | X | 6823250..6823355 | 5..110 | 530 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:05:11 has no hits.
FMO14034.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:22:34 Download gff for
FMO14034.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Atx-1-RB | 42..746 | 1..705 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:58:49 Download gff for
FMO14034.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Atx-1-RB | 42..746 | 1..705 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:58:49 Download gff for
FMO14034.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6823245..6823355 | 1..110 | 98 | -> | Plus |
| X | 6823413..6823638 | 111..336 | 100 | -> | Plus |
| X | 6823692..6824059 | 337..705 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:22:34 Download gff for
FMO14034.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6717278..6717388 | 1..110 | 98 | -> | Plus |
| arm_X | 6717446..6717671 | 111..336 | 100 | -> | Plus |
| arm_X | 6717725..6718092 | 337..705 | 99 | | Plus |
