FMO14036.5prime Sequence
1030 bp (997 high quality bases) assembled on 2014-01-10
> FMO14036.5prime
TCAGTCGACATGGATGAGATTTTCAGTTTATATTGCACAATACAGAAGAA
TAGGCAAGTAATGGAGCAGCTAGACAAGGAGTGCGAAACCATCAATGTGG
ATGATGTGCTTTCCAAGCCGGCGGCAGCCAACACCGAATCTGCCCAGCCA
CGCATCTCTGCCCGTTGGCTGCCGGATGAGATCCAAGTGGCATTGCTCGC
GATCCGCGAGTATGGAAAAAACTTTCCTACGATTGCCAAGGTGGTGGCCA
CCAAAACGGAGGCGCACGTGCGCACCTTTTACTTAAACAATCGGCGCCGC
TACAATCTCGACCAGATCGTAAAGGAGTACGAGGCTGGCAAGTCCGAGGA
GTCGGGCGCAGAGGAGCAGACCGAGCCTGCTGTCGACGCAGCCGCGGCTG
GCGCCGCAACAGCATCTGCGCCCAGCGCGGCTGATTCTACATCCGCCGCG
AGCGCGACAGCAGACAGGAAACAGTCCACCGAAAACAGCAACAACGGAGT
TGAGACCATGCAGGAATCGTTGCCCAAGAAGGAGGACCCTAAGAAGCCGG
AGCTGGCAGCGGCTGTGCTCAAGATTGGCGTGGCCGAGGCAGCAGATGCC
GTGGCCACTGTGGCATCCAGCACAGCCTCTGGCGTCATCGGTGCCGCCAC
CTCCGCCAGCAAGCCCAGCACCAGTGCTACAATCACCATTATAGATGAGT
CTGACACGGCCACGAACTCGAGCAGCGACGTTGTCACCACTGGACTTGCC
ACATCCACCGGCTCGTCCGCACTGTCCAGCACAACTAGTGCGCCCGCATC
CAAAACGCAGACCAGCAGCGAGGAGTTGTCCGCTCAGAAATCCAATCCCG
CGAGCGGGATCGCAGCCATAGGTGCTGCAACGGGCGGTGGCCAGACTGCC
AACAGCTCTGGCAGCAAGCGGGATAAGCTCTGTATTGCTCGTCGCGACAG
CCGCCGGCGAAAAAAATCGCGGCTCAGCAACGGAGGCGAAGCACGTCCCA
AGAGTCCCTGTAACGCAAGCTTTCTAGACA
FMO14036.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CoRest-RJ | 2203 | CG42687-RJ | 54..1055 | 10..1010 | 4775 | 98.8 | Plus |
| CoRest-RI | 3255 | CG42687-RI | 2058..3030 | 39..1010 | 4630 | 98.8 | Plus |
| CoRest-RH | 3155 | CG42687-RH | 1958..2930 | 39..1010 | 4630 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19528894..19529601 | 229..937 | 3495 | 99.9 | Plus |
| X | 23542271 | X | 19528635..19528823 | 40..228 | 945 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:05:16 has no hits.
FMO14036.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:22:36 Download gff for
FMO14036.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CoRest-RJ | 47..1055 | 1..1010 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:58:53 Download gff for
FMO14036.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CoRest-RJ | 47..1055 | 1..1010 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:58:53 Download gff for
FMO14036.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19528635..19528823 | 40..228 | 100 | -> | Plus |
| X | 19528894..19529601 | 229..937 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:22:36 Download gff for
FMO14036.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19422668..19422856 | 40..228 | 100 | -> | Plus |
| arm_X | 19422927..19423634 | 229..937 | 99 | -> | Plus |
