FMO14039.5prime Sequence
597 bp (597 high quality bases) assembled on 2014-01-10
> FMO14039.5prime
TCAGTCGACATGAGCAGCGCTTTGAACGCCAAGGAGTTACTTATACGCGC
CGTGGAATGCGACCAAGTTGGACGGATCTTGGAGGCGCAAACGCTGTACA
CAGAGGGGATCGGGCAGTTGATGCAGTTCGTCAACGGGGAACCGGATGAA
GCCAAACGGAAGGGGTTCCTGACCAGGATCAAGGAGTACATGGATCGGGC
TGACGCAATTAAGGCGCGGATCAATGGCAAACTAATGCTCGGCGAGGTGG
TTTCCCACGTTTCCATCGACGAGAATGATACGGGCTTCGACTACGATCAG
CTCTTCGGGAAATACATGGACGACAAGACCGTCGAGATCATGCTGGAGGA
ACCCTACATGACGCAGAACTATCAGTATCAAAATCTAATAAGATTCTTGG
AGCTAGCTGCCACAAATTGCCCAAACCTAAAGTATTTTCGACTGATCACC
AAAGAGTACAAGGATGCAAAGAATCCAGATCAGCAGGAAACAAATCTTGG
ACAGATCAAGGGTGACTTGGAGCGGCGGAACGTGACTGTCTACATAAAAT
ACGAAGACTCTCTGCACGATCGAAAAATTGCAAGCTTTCTAGACCAT
FMO14039.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14985-RB | 2808 | CG14985-RB | 126..695 | 10..579 | 2850 | 100 | Plus |
| CG14985-RC | 1859 | CG14985-RC | 126..695 | 10..579 | 2850 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4003599..4003964 | 10..375 | 1830 | 100 | Plus |
| 3L | 28110227 | 3L | 4004133..4004339 | 373..579 | 1035 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:05:48 has no hits.
FMO14039.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:22:51 Download gff for
FMO14039.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14985-RC | 126..700 | 10..587 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:59:12 Download gff for
FMO14039.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14985-RC | 126..700 | 10..587 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:59:12 Download gff for
FMO14039.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4003599..4003964 | 10..375 | 100 | -> | Plus |
| 3L | 4004136..4004349 | 376..588 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:22:51 Download gff for
FMO14039.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4003599..4003964 | 10..375 | 100 | -> | Plus |
| arm_3L | 4004136..4004349 | 376..588 | 98 | | Plus |
