FMO14041.5prime Sequence
453 bp (453 high quality bases) assembled on 2014-01-10
> FMO14041.5prime
TCAGTCGACATGATCTCCTTTGGAGTGGCGCACGTGTTTTATATCAGCGC
CTTTGGCTGGAAGCCCATAAAGTGGTTCATTGGACTGCTCTTGTACGTGG
CCGTATCGCTTTTTGTTTACTTCGTGCACACGAAACTGGACGAGATTCTC
ATCATCGGAGTGCCCATCTACTGTTTCCTGATCACCACAATGCTGTGGAG
ATCGCTGGCCCGCGCCGTGGACTCCAGGAACTTCCTCGCCGTGTTCTGTG
CCATCGGAGCCATTCTGTTTGTGATCTCCGACGCCCTGATCGCGGTCACC
ATGTTCGTGGGCGTGCCCCTGCCCTGCGCCCGCCTCCAGATCATGATCAC
CTACTACGCCGCCCAGTTTGCCATTGCGCTGAGCACCGCGGACGACGGTC
CTGCCCTCCAGCGCTCCCTTCGCAAGAAAATTAAGGCAAGCTTTCTAGAC
CAT
FMO14041.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7582-RB | 979 | CG7582-RB | 301..726 | 10..435 | 2130 | 100 | Plus |
| CG7582-RA | 1190 | CG7582-RA | 615..937 | 113..435 | 1615 | 100 | Plus |
| CG7582-RA | 1190 | CG7582-RA | 455..557 | 10..112 | 515 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29680494..29680816 | 435..113 | 1615 | 100 | Minus |
| 3R | 32079331 | 3R | 29680874..29680976 | 112..10 | 515 | 100 | Minus |
Blast to na_te.dros performed 2014-11-29 00:05:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osvaldo | 1543 | Osvaldo OSV 1543bp | 846..900 | 276..222 | 104 | 65.5 | Minus |
FMO14041.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:22:55 Download gff for
FMO14041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7582-RB | 296..732 | 1..441 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:59:15 Download gff for
FMO14041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7582-RB | 296..732 | 1..441 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:59:15 Download gff for
FMO14041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29680488..29680816 | 113..441 | 99 | <- | Minus |
| 3R | 29680874..29680981 | 1..112 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:22:55 Download gff for
FMO14041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25506210..25506538 | 113..441 | 99 | <- | Minus |
| arm_3R | 25506596..25506703 | 1..112 | 96 | | Minus |
