FMO14046.5prime Sequence
329 bp (234 high quality bases) assembled on 2014-01-10
> FMO14046.5prime
TCAGTCGACATGTCGGACCACGCATTTATCGCCGAGCAGATTGCAAGTGG
CCTTTACTCCTTGGAGCCCAAGCTCAAGGGAAAGAGTTTCGTCTGGAATG
TTTTAAGCGGGATTATTAAGGATGATGGATCAATTTTAAACGACTTGGTT
TACTGCCGCTCATGTCGAAAAATTCCTAAAATGTGTTGGCAATCAAACTT
CAAATTTAGCCAGGCACAAAATGTTGTCAATCTTTTCGGCAACCAACTGC
CCTACGGATTGGGTCTGCTCCAGACAAAAAGGAGGCGTTGAATGCGTTTC
CAGTGGATGGCGAAGGACGGCCGCCGTTT
FMO14046.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4004-RC | 1288 | CG4004-RC | 56..377 | 10..329 | 1455 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 12746372..12746686 | 10..323 | 1370 | 97.8 | Plus |
2R | 25286936 | 2R | 1093327..1093544 | 76..295 | 790 | 92.7 | Plus |
2L | 23513712 | 2L | 20220564..20220793 | 296..61 | 730 | 90.3 | Minus |
2R | 25286936 | 2R | 1278158..1278195 | 113..76 | 190 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:05:36 has no hits.
FMO14046.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:22:46 Download gff for
FMO14046.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4004-RC | 49..377 | 1..329 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:59:04 Download gff for
FMO14046.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4004-RC | 49..377 | 1..329 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:59:04 Download gff for
FMO14046.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 12746365..12746654 | 1..293 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:22:46 Download gff for
FMO14046.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 12640398..12640687 | 1..293 | 97 | -> | Plus |