FMO14048.5prime Sequence
836 bp (836 high quality bases) assembled on 2014-01-10
> FMO14048.5prime
TCAGTCGACATGCCCATGAATGGACAGGCGGGTGGACAAAATGGACGCAA
GCGTCGGGACAACGAAGATTTCTCGGTGAAGTTATCCACCATCAGGATCT
GGATTCACGAGAAGGACATTGGCAAGTTGACGCGTATTTTATGGGGTGGC
CAGGGCAACAGACTATGCCAACAGGCCAGCAACAATGGTCGAGTGAAGCG
CTTCCTCGCAGCCGTTCCCCATGTCATGAATGCCATCAAAGATCTGCACC
AGGCGGTCATCGACAACAATCTGGAGACCGTGCAGGCGCAGCTGGAGCCA
CCGGTGCCCAGTGCACTGGTCACCTGCAAGGACGGCAATGGCTTGAACAT
CATACACAAGGCCGCCGGACTGGGCCACACCAAGCTGCTGGAATACCTGG
TGGGCATTTGGCCCGAGGGCGCCCATGAGACGGACATTACCGGAAAGACG
CCGCTCCACTGGGCCGCCAGTGCCAAGAACAACATGCGATGCTACACACT
GCTCACCCAAGCGGGTTGCGACGAGGAGGCCGTCGATTATAAAATGAAGA
CCCCCTCATACTATCGCCACAAGCCGCACGAAATCGAGCGCGCCTTCCTG
GTTTATGTGCCGGATGCACCTCGCGTCTCCCCCGACAGCGCCACCGATTG
GGACGCCTTGTGCGATGAGAGTGGAGTGGACAACGGAGCGGGGGGCGATG
CCAGCTCCAAGAAACTGGACATCAAGGTGCCGCCTTCTGTGAATGGCCGA
AATCGCTGGACGACAGCCTTGAGAACACCTCGGAGCTAGACACCAACGAC
GGAATATTGGAAGAGCTGGCAAGCTTTCTAGACCAT
FMO14048.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30271-RF | 1600 | CG30271-RF | 199..1008 | 10..818 | 4025 | 99.9 | Plus |
| CG30271-RI | 2185 | CG30271-RI | 281..1074 | 10..802 | 3945 | 99.9 | Plus |
| CG30271-RH | 1656 | CG30271-RH | 107..900 | 10..802 | 3945 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22819641..22819953 | 228..540 | 1565 | 100 | Plus |
| 2R | 25286936 | 2R | 22820159..22820329 | 541..711 | 855 | 100 | Plus |
| 2R | 25286936 | 2R | 22819421..22819583 | 66..228 | 815 | 100 | Plus |
| 2R | 25286936 | 2R | 22820385..22820478 | 710..802 | 420 | 98.9 | Plus |
| 2R | 25286936 | 2R | 22818910..22818967 | 10..67 | 290 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:05:42 has no hits.
FMO14048.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:22:48 Download gff for
FMO14048.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30271-RF | 193..1013 | 1..824 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:59:08 Download gff for
FMO14048.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30271-RF | 193..1013 | 1..824 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:59:08 Download gff for
FMO14048.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22818903..22818967 | 1..67 | 94 | -> | Plus |
| 2R | 22819423..22819583 | 68..228 | 100 | -> | Plus |
| 2R | 22819642..22819953 | 229..540 | 100 | -> | Plus |
| 2R | 22820159..22820329 | 541..711 | 100 | -> | Plus |
| 2R | 22820387..22820478 | 712..802 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:22:48 Download gff for
FMO14048.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18706408..18706472 | 1..67 | 94 | -> | Plus |
| arm_2R | 18706928..18707088 | 68..228 | 100 | -> | Plus |
| arm_2R | 18707147..18707458 | 229..540 | 100 | -> | Plus |
| arm_2R | 18707664..18707834 | 541..711 | 100 | -> | Plus |
| arm_2R | 18707892..18707983 | 712..802 | 98 | -> | Plus |
