FMO14053.5prime Sequence
648 bp (648 high quality bases) assembled on 2014-01-10
> FMO14053.5prime
TCAGTCGACATGAATGTCCATGGCGAGCCGGTTGTGAACGATAAGAATTT
GATGATCCCGCCGCAAAACTACAATGTAAAGTGCTTGTCTATGGGCATGC
TGACACCTGTAGAGACCTCTGTTATCTGGCGAGGTCCTCTTGTAATGTCA
GCAATACAACGACTGCTAAAAGGTACTGATTGGGGGCTTCTAGATGTCCT
AGTTATAGATACTCCACCGGGCACTGGAGATGTACATCTCTCACTATCCC
AGCATGCACCTATCACAGGGGTTATCCTGGTAACAACACCTCATACTGCA
GCTGTTCAGGTGACCTTGAAAGGTGCAAGCATGTACGAAAAGTTAAATGT
TCCTATCTTTGGCGTAGTAGAGAACATGAAGTACACCATTTGTCAGAACT
GTAATCAACGATTGGAGTTTTTTAAAGACAGCCGTATAAGTTCTCTACCG
CGCAAGCTAATTTCTCTTCCGTTAGACTCACGAATAGCGGATAGCAACGA
GAGTGGAGTGCCTGTTGTAATAAAATATCCGGACAGCAAGTACTCTTATC
TATTTACCCAATTGGCTGAGGAGATTACACAAATACTTAACGAACAAAGA
TGTAATCAAAATCAAAATAACAGTGCACATGCAAGCTTTCTAGACCAT
FMO14053.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:06:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3262-RF | 900 | CG3262-RF | 258..879 | 9..630 | 3095 | 99.8 | Plus |
| CG3262-RE | 7023 | CG3262-RE | 274..895 | 9..630 | 3095 | 99.8 | Plus |
| CG3262-RD | 1013 | CG3262-RD | 274..895 | 9..630 | 3095 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:06:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 22240239..22240860 | 9..630 | 3095 | 99.8 | Plus |
Blast to na_te.dros performed 2014-11-29 00:06:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib3 | 2883 | transib3 TRANSIB3 2883bp | 1498..1536 | 199..161 | 114 | 76.9 | Minus |
FMO14053.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:23:13 Download gff for
FMO14053.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3262-RD | 271..898 | 5..634 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:59:34 Download gff for
FMO14053.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3262-RD | 271..898 | 5..634 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:59:34 Download gff for
FMO14053.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 22240236..22240868 | 5..636 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:23:13 Download gff for
FMO14053.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 22240236..22240868 | 5..636 | 98 | <- | Plus |
