Clone FMO14054 Report

Search the DGRC for FMO14054

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:140
Well:54
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG42324-RH
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO14054.5prime Sequence

438 bp (438 high quality bases) assembled on 2014-01-10

> FMO14054.5prime
TCAGTCGACATGCTCAAGCTGGTGGATCGAAATGCCGGCGAAAGGGCACA
GTTGACCAGCGATGTGGCCACTTTGAGTGTGCGACTCGCCCAGGCAAACT
TCAACATCGCCAAGCTGCAGAGGGAAATCGAACGCTACAAGGCCGACATT
AGCCTGGCCATCCAATTGCTGCAGTGCAAGCCGGATAGTTTTGTGTCCCA
GAAAGTGTCATCGCTACCCATTGATATTCAGTCGAAGGTGTCGGCGTACA
TGAGACTGGAGACGAACTCCCACTCCGATTCCGAGTGCAGCAATAGTGGA
GTTGGCGTGGCCACCACAGCTTCCTACAAAGTGCTTCCGGCCTCCGATTC
GCCGCCCCCATCCGCCTGCCCCTTCCCGCCCACGGCCATGGTGTATTCGA
TGAGGGGAATCGGTAGGTGTGCAAGCTTTCTAGACCAT

FMO14054.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:06:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG42324-RH 982 CG42324-RH 350..760 10..420 2055 100 Plus
CG42324-RF 1209 CG42324-RF 577..987 10..420 2055 100 Plus
CG42324-RK 5716 CG42324-RK 577..989 10..422 2050 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:06:28
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3504887..3505094 213..420 1040 100 Plus
3L 28110227 3L 3486159..3486279 10..130 605 100 Plus
3L 28110227 3L 3504720..3504803 130..213 420 100 Plus
Blast to na_te.dros performed on 2014-11-29 00:06:29 has no hits.

FMO14054.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:23:14 Download gff for FMO14054.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42324-RF 577..987 10..420 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:59:34 Download gff for FMO14054.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42324-RF 577..987 10..420 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:59:34 Download gff for FMO14054.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 3486159..3486278 10..129 100 -> Plus
3L 3504720..3504803 130..213 100 -> Plus
3L 3504888..3505094 214..420 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:23:14 Download gff for FMO14054.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3486159..3486278 10..129 100 -> Plus
arm_3L 3504720..3504803 130..213 100 -> Plus
arm_3L 3504888..3505094 214..420 100   Plus