FMO14057.5prime Sequence
755 bp (755 high quality bases) assembled on 2014-01-10
> FMO14057.5prime
TCAGTCGACATGGCACGCGACACACAAGGAACGCAGGGAACCCAGAGTCA
GGCCTCCAATATCTGGACGCAGGTGGAGAGCCAGCCGATGGAGAAGATAG
TCTGGGGTCGATTGTACGGCAAGAACATTAAGATCAAATCGCTGGATCTC
AACAACGACGAGTTCACCGCAGGACGAGGGGAGGCCAACGACTTGATCCT
CACGCTCAACGATTTGCCCGAGAAAATCCTGACGCGCATTTCCAAAGTGC
ATTTTATCATAAAGCGGGCAAACTGCGAACTTACCAATCCAGTTTATATT
CAGGATCTCTCACGCAACGGGACGTTTGTGAATAACGAGAAAATTGGCAC
AAACAGGATGCGAATCCTAAAGAATGACGACGTAATTTCCCTGTCCCACC
CAACGTACAAAGCCTTTGTATTCAAGGATCTCAGCCCGAATGAGTCGATC
GGGCTTCCCGAGGAGATTAACAAGACGTATTATGTAAATCGCAAGCTGGG
ATCTGGAGCGTACGGACTGGTGCGTTTGGTCTATGACACCCGCACCTGCC
AGCAGTTTGCGATGAAAATCGTTAAAAAGAATATGCTCTCTGGGGCGCGA
CCCAGTACCAATTTCAGTGATCCCGACCGGGTGCTGAACGAAGCCAAGAT
TATGAAGAATCTTTCACATCCGTGCGTGGTTCGCATGCACGACATCGTGG
ACAAGCCGGATTCTGTGTATATGGTGCTGGAGTTATGCGCGGCGGGCGAC
CTGCT
FMO14057.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:06:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lok-RD | 2310 | CG10895-RD | 381..1126 | 10..755 | 3670 | 99.6 | Plus |
| lok-RC | 2163 | CG10895-RC | 381..1126 | 10..755 | 3670 | 99.6 | Plus |
| lok-RB | 2105 | CG10895-RB | 320..1065 | 10..755 | 3670 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:06:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20062732..20063067 | 411..745 | 1615 | 99.4 | Plus |
| 2L | 23513712 | 2L | 20062147..20062306 | 145..304 | 800 | 100 | Plus |
| 2L | 23513712 | 2L | 20061877..20062012 | 10..145 | 680 | 100 | Plus |
| 2L | 23513712 | 2L | 20062542..20062653 | 301..412 | 560 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:06:32 has no hits.
FMO14057.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:23:16 Download gff for
FMO14057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lok-RB | 310..1065 | 1..755 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:59:36 Download gff for
FMO14057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lok-RB | 310..1065 | 1..755 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:59:36 Download gff for
FMO14057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20061867..20062012 | 1..145 | 96 | -> | Plus |
| 2L | 20062148..20062305 | 146..303 | 100 | -> | Plus |
| 2L | 20062545..20062653 | 304..412 | 100 | -> | Plus |
| 2L | 20062734..20063076 | 413..755 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:23:16 Download gff for
FMO14057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20061867..20062012 | 1..145 | 96 | -> | Plus |
| arm_2L | 20062148..20062305 | 146..303 | 100 | -> | Plus |
| arm_2L | 20062545..20062653 | 304..412 | 100 | -> | Plus |
| arm_2L | 20062734..20063076 | 413..755 | 99 | | Plus |
