FMO14063.5prime Sequence
1124 bp (1015 high quality bases) assembled on 2014-01-10
> FMO14063.5prime
TCAGTCGACATGAGAAATCAACGGACTATAACCGATTTGCCATTCGAAGT
GCTCGATATCATATTTAGTAACTTACGAAATCTAAGGGACAAACTTCGAC
TGGCGCAGGTTGATGATTATCTGGGAAAAGCGTTTTCGTACCACAGCCGC
AGTGATTACAAGAAGTTCTCACCAAAAATACATTTTCCCGTTCGACTTTA
TCGAGTTCTGCTGGCGAATTGTGGCCCTTCCATTGTGGAATTTACCTGTG
GATCGGACACCTGGAGCGATCTGTTGGCCAAATCGATTGCGAAGTACTGT
CCCAACCTGGAGTCGGTGAACATCAGTGCTACATTAAGAAATAGTCACAG
TCTTCAATTTTTTCTATTGAATTTGGCGAATTCTTTAATATCGGTCGAAC
TGAAGCTCAACGATAGTTGCCAATCGCCGAGGATACTTAATGCCGTCGCC
GAGCTGAAACACTTGAAAAAATTCTTGTATGAAGGATACATTGACCGGGG
AGTTAATCAGCTGTGCAAACTGGTTGATCTGGAGGAGCTGCAACTCATCT
ATCAAGGTAGAGGATATAGATGCAGAGCAGTTAATCTTCTTCAAATTTGC
GGAAATATGACAAATCTTCGGCGTTTGACTGTGAGCAATATATCGATATC
TCAACCAGAAAGCTTCCATCCCATGATATGGCCAAACTTAAAAGATTTGA
AAATGCAAAATTGCGAAATCTCCACAGTGATGCCCGATTGTCCCAAGCTG
AAAACCTTATATATCAAATTCTGCAAATGTAGAATCAAAGGATATGTATG
CAGTTTTATTTTGAAAACGGCAATAATATCGAGGAAATCGATGAAGCTGT
GAACCGGCACCATTTGATGGCCAGAGTTTCCTTCAAGTCATTCGAAGCTG
TCCAAAATTGCAGTGTTGTCCACTCAAATGGGGGGTATCAGATCTACTAG
CTTTTGTTACATCGTAGTGATATCTCAAGAGACTGCATCACGCGAAAGAC
CTTCGAGCTGATATTGTACTGCCGAGACAGCTTAATGGTTCGACGATTTT
ACACGGAACTTCTATTCTGACTAATTCTAGGCTTAACTGTTACAGTTTGC
AAGCTTCGAGACATGTTTGGCGCG
FMO14063.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:06:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG44005-RB | 1406 | CG44005-RB | 55..1126 | 10..1064 | 4885 | 98.1 | Plus |
| CG44005-RA | 1247 | CG44005-RA | 55..1126 | 10..1064 | 4885 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:06:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18071573..18072069 | 506..10 | 2470 | 99.8 | Minus |
| 3L | 28110227 | 3L | 18070683..18071224 | 1029..501 | 2085 | 97 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:06:49 has no hits.
FMO14063.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:23:25 Download gff for
FMO14063.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG44005-RA | 55..1133 | 10..1070 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:59:45 Download gff for
FMO14063.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG44005-RA | 55..1133 | 10..1070 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:59:45 Download gff for
FMO14063.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18070683..18071222 | 503..1029 | 97 | <- | Minus |
| 3L | 18071577..18072069 | 10..502 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:23:25 Download gff for
FMO14063.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18063783..18064322 | 503..1029 | 97 | <- | Minus |
| arm_3L | 18064677..18065169 | 10..502 | 100 | | Minus |
