FMO14064.5prime Sequence
1122 bp (970 high quality bases) assembled on 2014-01-10
> FMO14064.5prime
TCAGTCGACATGAATAAATGTCCTCGCTGCAACTGCGATGCTACAGGACA
GAATCGCCTCGTCACCGACAGCTGTGGACACACCAAGTGTCGTCTCTGCC
TGGTGGCGGATGTATCGGATTGCCTGGAATGTCGAGTTGCACGAAGTGTC
GATATCCAGGAGACACAGGAAACGCAAGCAAGGACGTCGGCTGATAAGCG
AATAATTGTCACAGATAAGGGCTACCACTGTACCGTCTGCAATAAGGATT
TTCGCAGCCGGACCCAGCAGTATTACCACCTCACCTGCGGCAACGATCTT
CTCAAGAAGTTCAACTGCAAGGAGTGCGGACGCAGATTTGCTACCAGTTC
ACATTTAAAGTACCATCTAATGAGCCATGAGAAACAATCAAAACACTCGT
GCAGCGTCTGCCACAAAAGTTTCAAGCAACCAATTGTTCTACAGCGCCAC
ATGCTTACCCACAACCAGGAGAAGCATTTGTGCCCAATCTGCCAGAAGGT
TTTCCGCCGCAAGAGCTCTCTTGCCAGCCACCTGGCGATCCACAGCGATC
TCGGCCTGCAATTTAAATGCGAGCTCTGCTCTAAGCATTTCCAGAACAAG
GCCAATTTGAACCAGCATCTGCGGAAACACGACAAGAACAATATTCGGCA
CATGTGTAAAGTGTGCCAGAAGTCCTTTCTGCGACAAACCACGCTTCGGC
TGCACATGAAGCGCCACTCAAATCGCGAACGTCAGTCCTGTTCCCTGTGC
GGCAAAAGCTACAATGATCCGGATGCTCTGGGCCGACATTTAAGACAACA
CAAGACTGCCGAACGCTACCGCTGTATCCAATGTGACATCACTATCAACC
GAAAGGACACATGCTGCGAACATCTGCGATCCATGCACCCTGGTTGTGCG
TTTGCCAGTACTGTTTGAAATGGTTACCCCGGAGTTCCAATGCTCCAGGA
GGCCCACGACGTCGGAAAAAAGACCATTCTCAGACTGTAAGAATACCACA
GTGTGATCCAGAGTGGTGGGCACGGTTGACGCAGTTGATGTGCCTTGCAT
TCTACGCCCACTGCTACCTCAACTCCTTGAACTGAATGGAAAAAGGAAAA
GCTGTCTCCAAACCATCTGGCC
FMO14064.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:06:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42727-RA | 2285 | CG42727-RA | 72..1172 | 10..1119 | 4890 | 96.9 | Plus |
| CG42726-RA | 2285 | CG42726-RA | 72..1172 | 10..1119 | 4890 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:06:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15348502..15349266 | 334..1106 | 2930 | 95.7 | Plus |
| 3R | 32079331 | 3R | 15348119..15348442 | 10..333 | 1620 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:06:52 has no hits.
FMO14064.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:23:28 Download gff for
FMO14064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42727-RA | 66..1090 | 1..1035 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:59:47 Download gff for
FMO14064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42726-RA | 66..1090 | 1..1035 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:59:47 Download gff for
FMO14064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15348113..15348442 | 1..333 | 98 | -> | Plus |
| 3R | 15348502..15349196 | 334..1035 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:23:28 Download gff for
FMO14064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11173835..11174164 | 1..333 | 98 | -> | Plus |
| arm_3R | 11174224..11174918 | 334..1035 | 97 | | Plus |
