FMO14065.5prime Sequence
418 bp (292 high quality bases) assembled on 2014-01-10
> FMO14065.5prime
TCAGTCGACATGGAGAAAAAAAACAAATGTTGTAAGCACTTTAAGGACCA
TGGGGCGCAGAAACCATCACAACTCAATGAGCACAAGGAGCATAAATTAA
GGGACCATTACCGCAAGGAACGAATGAAGTCTTCAGAGAATGTGCAAAAG
TCCTACAAACATAATTATACGACAAATCAAAATCAGATACGGCAGGACTA
TTATTGCGATCATTCGTGGGAGGATCGTGAGTCTCCTTCTACCATGAAAA
CCATGCTCAGTATTTGTTTTCAAAAATGGTTTCATGGTAATTATCCCCCG
CCCAAAAGAAAAATGAAACCCCATCGAATTTAAGGGGATGAGCACCCAGT
TAAATTACCCCCCAACCAGCATTGTCCACAAATCCCTTTATGAAAAAAAA
GGGAAACCCGTTAAAAAC
FMO14065.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:06:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31752-RB | 1566 | CG31752-RB | 33..443 | 10..402 | 1365 | 91.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:06:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18840929..18841162 | 300..70 | 965 | 96.2 | Minus |
| 2L | 23513712 | 2L | 18841219..18841278 | 69..10 | 300 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:06:54 has no hits.
FMO14065.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:23:29 Download gff for
FMO14065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31752-RB | 24..321 | 1..295 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:59:50 Download gff for
FMO14065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31752-RB | 24..321 | 1..295 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:59:50 Download gff for
FMO14065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18840914..18841162 | 70..311 | 94 | <- | Minus |
| 2L | 18841219..18841287 | 1..69 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:23:29 Download gff for
FMO14065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18840914..18841162 | 70..311 | 94 | <- | Minus |
| arm_2L | 18841219..18841287 | 1..69 | 94 | | Minus |
