FMO14067.5prime Sequence
1041 bp (915 high quality bases) assembled on 2014-01-10
> FMO14067.5prime
TCAGTCGACATGGACTTAGGAGCTTATAAATTGAGTGAATACATCCCCGC
CAAGCCGCTGGTCGGTAATCTGGAGTTGTGTTTCACGGACGAAGAGCAGA
GACCCACCGAAACATGCGGCCAACTTAAATGCTGCGATATTTTAAAGTTC
CCATTCGCCCGCCCTGATTTCCAGCCAAGTTCAGTGGAGATAAAGGAGAG
CAAGGTGCTCGTGTCTGCTGATAAGGCTACAGAGACAAAACGCGTGGTGG
AGCTGACTCTGGAGTCCACGTTCGATTACCAGCCCGGGGATACCATTGGA
ATTTTGCCTGCTAATAAACTCGAACAAGTGGAAAGTCTGCTCCATCGGCT
GGAACTGTTAGACCAGGCCGACACCACTTGCCACTTAAAGTTGGTGTTCA
ACTGCGCCAATAAGAATGCTAAGCTACCCGCCCACATTCCAGCAACTACT
ACTCCCCGGGAGATCCTTACCCACTGCCTCTCCCTTAATTTTGTTCCGCA
GAAGCAGCTCCTCAGCGCCCTGGCCGGATTTACAAGCGATGACAAAGAGC
GTTGTTTCCTGTCCTGTCTGTCCTCTAAACAGGCCACCGAGTACTACCAA
TCGCTGATATTAGAGCAAGGCCTGCTTTTCATAGACATTCTTGAAGTGTG
CGTCAACTGCAGGCCACCACTGGCATTCCTGGCAGAGCACTTGCCACGGC
TGCTGCCGCGACCGTACTCCATTGCCAACAGTCCCTTGGGAGGCTAGTAA
TCGCGAACTTCGCGTTATCTACTCGCTGCTTCAGCCTCAAACCTGGAAGT
CACAACCAGCATGTTGGGAGGCGGGCTGCACAGCAAAGCAGTCCGGGAGC
ATTCCAAAAAAGTAGTTATCTACCCACGAATGAGCAACCTAATCCGTTAC
ACAAAGCGGGATGTGGACAGAAACAAATACTTATTGCTGTTGGCCCAGGG
TCTGGCGCCTTTTCTTGGATTCTTAGCCCACAAGGAAGAGCTTAATAAAA
CAGCAGCCGCACGGTCAACGGCCAATCTCTGCCTCATACTT
FMO14067.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:07:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14882-RB | 1754 | CG14882-RB | 82..1076 | 10..1011 | 4730 | 98.7 | Plus |
| CG14882-RA | 1511 | CG14882-RA | 45..1039 | 10..1011 | 4730 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:06:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16443426..16444332 | 98..1011 | 4065 | 98.6 | Plus |
| 3R | 32079331 | 3R | 16443288..16443377 | 10..99 | 450 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:07:00 has no hits.
FMO14067.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:23:33 Download gff for
FMO14067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14882-RA | 45..1057 | 10..1027 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:59:52 Download gff for
FMO14067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14882-RA | 45..1057 | 10..1027 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:59:52 Download gff for
FMO14067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16443288..16443377 | 10..99 | 100 | -> | Plus |
| 3R | 16443428..16444350 | 100..1027 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:23:33 Download gff for
FMO14067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12269010..12269099 | 10..99 | 100 | -> | Plus |
| arm_3R | 12269150..12270072 | 100..1027 | 98 | | Plus |
