FMO14069.5prime Sequence
684 bp (684 high quality bases) assembled on 2014-01-10
> FMO14069.5prime
TCAGTCGACATGTGCTACGTTATTATCACCATCGCCAGTCTGGTGTGGTT
TCTCTGTTCGCTGGTGGCCGACATGCTCTTTGCTGTGGCCCTGGTCACGC
CCAGGTGGCTGGTGGGCCCCGCCCAAGGAACAGACTCCACCGCCAGCTCT
CACCACCAATCCTCGGTGGGCATCTACACGCGCTGCAAGGTCATGCAGGA
GGGCGGATTCCAATGCGGCCGCTTCGACTTGGACGGACTGGCCACGGACA
GTAGCGTTTACCCCAACGAATGGAAAGCGGCAATGTTCTTCGTCATGCTG
GGATTTAGTCTACTCTCTGTAACGGTGATCCTGACCCTGATCACCTGCTG
CCGCCAGTCGGCCTGTGGCAAGAGCATACACAACATGACGGCCTGCGCCC
AGGTCGTAGCAGGAATATGTATGATGTTGGGTCTATTTCTGCATCCGATG
GGATGGCGAGCGAACCGGATTCAACGTCTATGCGGCATGGATGCCGAACC
CTTTTACCCCGCCGACTGTAGCATAGGAGTTTCATTCTACTGCGGAATCA
TTGGGGTACTCCTAACATTTACTGCCGCCGGTATAAGCCTAAAGGCAGAG
TCTTCCAATATGCGAACTCGAGTTCGCAGACGCGTGGAGGCGGGCAGTAA
ACTGGTCTGTATTCCGGCAAGCTTTCTAGACCAT
FMO14069.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:07:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3770-RB | 867 | CG3770-RB | 97..753 | 10..666 | 3270 | 99.8 | Plus |
| CG3770-RA | 1393 | CG3770-RA | 623..1279 | 10..666 | 3270 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:07:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24945761..24946164 | 10..413 | 2005 | 99.8 | Plus |
| 2R | 25286936 | 2R | 24946381..24946522 | 525..666 | 710 | 100 | Plus |
| 2R | 25286936 | 2R | 24946217..24946333 | 411..527 | 585 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:07:06 has no hits.
FMO14069.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:23:37 Download gff for
FMO14069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3770-RA | 614..1288 | 1..677 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:59:55 Download gff for
FMO14069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3770-RA | 614..1288 | 1..677 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:59:55 Download gff for
FMO14069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24946383..24946531 | 527..677 | 96 | | Plus |
| 2R | 24945752..24946163 | 1..412 | 98 | -> | Plus |
| 2R | 24946219..24946332 | 413..526 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:23:37 Download gff for
FMO14069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20833906..20834054 | 527..677 | 96 | | Plus |
| arm_2R | 20833275..20833686 | 1..412 | 98 | -> | Plus |
| arm_2R | 20833742..20833855 | 413..526 | 100 | -> | Plus |
