FMO14071.5prime Sequence
946 bp (946 high quality bases) assembled on 2014-01-10
> FMO14071.5prime
TCAGTCGACATGCATAAACGCCTGCAGTATGAAGAGGTGATGATTCCAGC
ACCTTGGGGTCACATAGCAGGCCGTTGGTATGGCAATCGAGCTGATAGAC
CCATTTTGGCAATTCACGGATGGCTGGACAATCTGGGAACCTTCGATCGG
CTGATTCCCCTGCTTCCCGACTACATAGGCGTGCTGTGCATCGACCTACC
CGGACATGGTAGATCTTCTAGGCTTCCGCCGGGTGTGCCCTACAACGTCT
ACGACTATGTGTTCATCATACCGAGGGTGATGAAGGAGTTCGGCTGGTCC
AAGGTCTCCTTAATGGGTCATTCCCTTGGAGGAGTGATGAGCTTCATGTA
CGCAGCCATGGCACCAAGCACAGTCGATATGATTATATCATTGGATGTAC
TGCTGCCGCGGAGAATCGAGGATCCCAGCAAGTTGACCAAGGACATAGAA
GGTTATTTGCTGGAGGAGAGGCGACAGGCGGATGGCACCGAACATGAGCC
GCCATCGTTCACCTTAAGTAAACTGCGTGAGACGCTCGCCCGGAACAGCA
ACAACTCGGTGCCGCAACACCTGGCCGATCACATGCTCCACCGCCAGGTG
GCCAAATCAAACATGTACCCGGAAAAGGTATTCTTCTCCAGAGATGGGCG
TGTAAAGTTCTATCACATATTCGACATTGAAAACGGACTTGCTCTTGAAA
TGGCGAGGCGCATTGAGAAGAAACCCTATCTGGTAATTAAGGGATCCCTT
TTCGCCATTTGTGGGACCTCGATGCAACGAAACAATGTCCATTCTGTCCC
ATGATAACCCCAACTTTGAGTTCTACGAAGTGGAGGGCGGCAAGCATCAT
GTCCACTGCATGCGCCGAGGAGTGTGCCAGCTATATCGTTCCCTTCATCC
GAATCACGACTCCAAGAAGCAGCATACTTGCAGCTTTCTAGACCAT
FMO14071.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:06:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15820-RA | 1183 | CG15820-RA | 191..1114 | 10..929 | 4280 | 97.9 | Plus |
| CG15879-RA | 1389 | CG15879-RA | 176..534 | 49..407 | 730 | 80.2 | Plus |
| CG5704-RB | 1289 | CG5704-RB | 159..469 | 37..347 | 535 | 78.5 | Plus |
| CG15879-RA | 1389 | CG15879-RA | 948..1039 | 813..902 | 185 | 81.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:06:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2173093..2173981 | 903..16 | 4120 | 98.3 | Minus |
| 3L | 28110227 | 3L | 2168405..2168763 | 407..49 | 730 | 80.2 | Minus |
| 3L | 28110227 | 3L | 2170373..2170683 | 347..37 | 535 | 78.1 | Minus |
| 3L | 28110227 | 3L | 2172503..2172675 | 215..43 | 310 | 78.6 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:06:38 has no hits.
FMO14071.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:23:18 Download gff for
FMO14071.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15820-RA | 185..1114 | 1..929 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:59:40 Download gff for
FMO14071.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15820-RA | 185..1114 | 1..929 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:59:40 Download gff for
FMO14071.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2173064..2173987 | 10..929 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:23:18 Download gff for
FMO14071.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2173064..2173987 | 10..929 | 97 | | Minus |
