FMO14073.5prime Sequence
780 bp (780 high quality bases) assembled on 2014-01-10
> FMO14073.5prime
TCAGTCGACATGTTTCCGCAGATATGGGGTGTGATTTTTTTGTTCACTCC
TACTGTTTTTAGTGAACTCTTTAAGGATCCGGAGCTGCTTGCCGGATTTT
ATCAGGGGGACATAAAAGCTCATCCAATTCGTACTCGAAACGGAATTGTC
AATCAGATTTATCACTGGCCCAATCGCACTGTACCATATATGATTGAAGA
TGATGCATTTGCCGACAGTCATTATCGGGAAATTCTTAGAGCCATTTCCA
TCATAGAGGAAAACTCATGCGTTATTTTCAAGCCAGCTACTGAAATGGAT
TTTCCCATGGCGCTCGTCATTACGTCAAAAGGTTTGGGCTGCAATACCGT
TCACTTGGGCTATAGGAATAAGACACAAGTGGTAAATCTGGAGATTTACC
CACTTGGCGAAGGCTGCTTTCGCATCGGTTCCATTATCCACGAGCTCCTT
CACGTTTTGGGCTTCGAACATCAGCATGTGTCCCAAAATCGGGACCAATA
CGTCAGCATCCAGTGGAAAAATATAAATCCGCAGTACAATATCAATTTCG
TGAACAACGATAATTCTACAGCGTGGCACGACTTTGACGAAGGCTACGAT
TATGAAAGTGTTATGCACTATGTGCCAAGGGCCTTTTCCAGGAATGGCCA
ACCCACAATTGTGCCCCTCCGCGAAGGAGCCGAAAATATGGGGCAACGAT
TTTATATGAGCGAAAAGGATATTCGCAAGTTGAACAAAATGTATAGATGC
CCTGATCATGTTGCAAGCTTTCTAGACCAT
FMO14073.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:07:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Semp1-RA | 789 | CG11864-RA | 9..762 | 9..762 | 3755 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:07:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15612521..15613072 | 762..211 | 2745 | 99.8 | Minus |
| 2L | 23513712 | 2L | 15613125..15613327 | 211..9 | 1015 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:07:15 has no hits.
FMO14073.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:23:43 Download gff for
FMO14073.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11864-RA | 1..767 | 4..768 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:00:00 Download gff for
FMO14073.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Semp1-RA | 1..767 | 4..768 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:00:00 Download gff for
FMO14073.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15612516..15613071 | 212..768 | 99 | <- | Minus |
| 2L | 15613125..15613334 | 1..211 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:23:43 Download gff for
FMO14073.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15612516..15613071 | 212..768 | 99 | <- | Minus |
| arm_2L | 15613125..15613334 | 1..211 | 98 | | Minus |
