FMO14074.5prime Sequence
790 bp (790 high quality bases) assembled on 2014-01-10
> FMO14074.5prime
TCAATCGACATGAAACTCGCTTCGCAATTTTGGCACACAGTCTGCCGTCA
TTATCGCACAAGTCGTTGGTTGCATATTCCGCCAGTTGAAAAGAGTGAAT
CAAATGACCAATTGAGGGACAAACTCGAGTACACTGAAGAGGTAATAAAA
CGCGCCATGACTTTGTATAAGCCAAATGAGATGATGCTGTCCTTTAATGG
TGGCAAGGATTGCACAGTCTTGCTGGATATTTTGGCCAGGATGACGCCAC
CCTCGATGCCACTGGGAGCGGTTTACGTGAAGTCTGCAAATCCATTCGAG
GAGCTGGAGAAGTTCGTGGATGATTGTGTACAGCGCTATGGACTACAGCT
GAGGCGATACGAAGGAGTGCTTAGGGTTGCCTTTGAGCAGCTGATAGCCG
AGGATTCCCAGGTGAAGGCCATCTTCCTCGGCTGCCGGCGCATCGATCCT
GAAAGCTGCAATCTATACGAGCTGGAACCTACCAACAACGGATGGCCAGC
GATGATGCGGATCTTCCCGCTGCTTGAGTGGAGCTACCACGACATTTGGA
ACTATTTGCGCTCAAACAATCTGCCCTACTGCTGCCTCTACGATCAGGGC
TACACATCTTTGGGAGATCGCAGCTCAACGCGGGTCAATCCTAGTCTGCT
GGCTTACGACGAAAAGCTGGACAAGATGACCTATCGACCGGCCTACGAAT
TGTAGAATGTGCGTCTTGAGCGGTTCAACAGGGATGAGCATGGCCAGGCC
TCAGTCAGCGGATCCAAACAAGCAAGCTTTTCTAGACCAT
FMO14074.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:07:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16848-RA | 1198 | CG16848-RA | 75..836 | 10..771 | 3690 | 99 | Plus |
| CG4407-RB | 1235 | CG4407-RB | 744..864 | 485..605 | 185 | 76.9 | Plus |
| CG4407-RA | 1338 | CG4407-RA | 847..967 | 485..605 | 185 | 76.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:07:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13412593..13413354 | 10..771 | 3690 | 99 | Plus |
| X | 23542271 | X | 12901724..12901844 | 605..485 | 185 | 76.9 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:07:18 has no hits.
FMO14074.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:23:44 Download gff for
FMO14074.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16848-RA | 67..844 | 1..780 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:00:02 Download gff for
FMO14074.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16848-RA | 67..844 | 1..780 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:00:02 Download gff for
FMO14074.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13412585..13413356 | 1..772 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:23:44 Download gff for
FMO14074.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13412585..13413356 | 1..772 | 98 | <- | Plus |
