FMO14076.5prime Sequence
1090 bp (962 high quality bases) assembled on 2014-01-10
> FMO14076.5prime
TCAGTCGACATGTGGCCTCCAGGGAGCGAGGATAGCTACTCCGCCAAAAT
GGACTACGGCAAGAGCGTGGTGAACATCCTGCCCAGCGTAGAGATGCTGG
TGAACTTTAATGGCGAAATGACGCGGTCTAGCAAACGGTCATGTCTACTG
TACGCGGAGAGAGTGGACTTCAAGGAGCTGCTGCAACTCCGATTAACGGA
GAAGTCCGATCAACGGCGCATGTACATCACCACAGTGGACAGCGCCTCCT
TTCAGGATCTCAAACAGGATCAGTCGCTGAATGTGTCATTCTCTGGGTTC
ATTGACAATGTAGTGCGCATGCTGAAGGACTGCCAGTCGGGTAAACTGGA
GCTGCACCTGACCACACGGGATCAGAACCTTTCATCCGGCAGGGAGGTCC
ACGACTATTATCTTCAGTTTGTTGAAATTCGGTCCTTTAAGAACCTGGTT
CACCTTAGCCTGCCTTGTCGTTCTGCTCCCTTGAACACCGTACTCTTCTA
CATAAACAGCATGCTGGAAGCCTCCCACAAAAAGCAATATATTCTCGAGC
AAAGTATGCAGCAAATGCAGGCTGAAATCAACGCACAACGCGCGCATGCG
GAAAGGTTGACCACGGAAAACACAAATATCAGGGAAGCTTTGGCCGAAAA
TACTCGCATCTTAGAGGAAAAGCATGCTGCCGAGGTCCATCAATACCAGG
AAAAACTGTCCAAAATAAACGAGCAGCGCAGCAATGAGCTGGAGAGAAAT
CGTAGAGCGATCTCCGGCTTTCAGCCCAATTGGACAGGCTTCGTTGGAGA
AAGCAGAACTAAGTCGGCCCAGAGCAGCCGAGAACGATGTCAAACCCTGT
CCGAGAGTTGTCCTGTTGCAAAGCAGAGTGTGCACTCTAAAGAGCAAATG
ACAACTGCACGGGATGTGCACATCAGAGCATGACGCAGTGAGTACAAATC
GAGACTCAGCAGCACACTGTCAGCTGCAGAACATATTCAAAGGAACAAGA
GAAGCAACTAGCCGCTGACTGAGCGAAAAGATCTGCCACCAGGCAGCTTG
ATGGCTCGAGAATTCTCAGCCACCGATATCTTAACAAGCC
FMO14076.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:07:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sas-6-RA | 1507 | CG15524-RA | 10..1053 | 9..1018 | 4345 | 96.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:07:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29995599..29996315 | 183..891 | 3140 | 98.5 | Plus |
| 3R | 32079331 | 3R | 29995366..29995540 | 9..183 | 860 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:07:23 has no hits.
FMO14076.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:23:47 Download gff for
FMO14076.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sas-6-RA | 1..1036 | 2..1004 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:00:04 Download gff for
FMO14076.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sas-6-RA | 1..1036 | 2..1004 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:00:04 Download gff for
FMO14076.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29995358..29995540 | 1..183 | 97 | -> | Plus |
| 3R | 29995600..29996451 | 184..1004 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:23:47 Download gff for
FMO14076.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25821080..25821262 | 1..183 | 97 | -> | Plus |
| arm_3R | 25821322..25822173 | 184..1004 | 95 | | Plus |
