FMO14078.5prime Sequence
759 bp (759 high quality bases) assembled on 2014-01-10
> FMO14078.5prime
TCAGTCGACATGAAAGGAAACAGACAGAAGACCTTCGTCGTGGAGGATTC
CGAATCGCAGAAGCCCGAAAAGAATCCGAGTCCTGAGCGCAAGGAGGATC
GCAAGGAGCGCAGGAGGGAGGAGGAAATGGAACGCAAGCGGGAACTGGAG
CGGCGAAAGGAACTCGCGAGGGAAAAGGAACGAGAGAAAAAGCAGCATCA
GCAGGAGTGGCGCAAGGAACTGGAGAAGGAACGTCAGCGTGAAAAGGAAT
TGCAGCGTGAACATCTGAGGAAGGAGCCATCCACTTCCTCCAAAAGGGTA
AATCCAGAAATCACTAAATTCGACGAGGAATTCGAGCAGGATATTCAGAA
GTTGGAGCAAAGTATTTGCCAACTGGACTTTCGCTCCAAAACGATGGCCA
CCATGTGGATGGACAAGCTGCGCCAACCACCACAAAATGCAGACGAGGCC
AGATCTAGGAACATAATAACATCCCATCTGCTCAAGTGCTGTGGCGATAA
CATATTCAATAAGGAGCCATTCAATCATCCTCCGCCACCACAAAATTTGA
CAACCATAAGGGAGATGATGTTCTTAACGCGCGATAGTACGTGCCACGGA
ATGCCCATTTCCAAGCAGATGGAACCCAACGCCAATCTAACCCAATTATT
TAGCGATTCATACGATGGTGGCGAGTTCCTGAGAAAGCTACCAGTGCCAC
GTGATGGGGCATTCTTTATCTATTACATGCAACCAAATTTGGCAAGCTTT
CTAGACCAT
FMO14078.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:07:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14154-RB | 952 | CG14154-RB | 83..817 | 7..741 | 3600 | 99.3 | Plus |
| CG14154-RA | 1019 | CG14154-RA | 160..884 | 17..741 | 3550 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:07:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10642048..10642601 | 17..570 | 2710 | 99.3 | Plus |
| 3L | 28110227 | 3L | 10642703..10642874 | 570..741 | 845 | 99.4 | Plus |
Blast to na_te.dros performed 2014-11-29 00:07:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2301..2426 | 124..249 | 117 | 54.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6799..6944 | 117..262 | 109 | 52.7 | Plus |
FMO14078.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:23:50 Download gff for
FMO14078.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14154-RB | 79..817 | 1..741 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:00:08 Download gff for
FMO14078.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14154-RB | 79..817 | 1..741 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:00:08 Download gff for
FMO14078.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10642048..10642601 | 17..570 | 99 | -> | Plus |
| 3L | 10642704..10642874 | 571..741 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:23:50 Download gff for
FMO14078.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10635148..10635701 | 17..570 | 99 | -> | Plus |
| arm_3L | 10635804..10635974 | 571..741 | 99 | | Plus |
