FMO14084.5prime Sequence
663 bp (663 high quality bases) assembled on 2014-01-10
> FMO14084.5prime
TCAGTCGACATGCTGTCTCTTCTGATATGGCAGACTTTCACATATTACTC
GGTACTTGAAAATATATGCCAGGAAATCAAGGAGCAGCTTAAGTTGAATA
TGAAACAGCTGCACATCACCCTCCTTTACGAGTCCTTGTGCCCGGACAGC
AGGAACTTCATGCATCAGCTAGGACCCGTTTACGAGGAGTTCGGGGACTA
CATTGATATACTCTTAGTGCCCTTCGGAAAATCGCAGTCGGAGCGCAATG
GTGCCATCTTCCACTGCCAGCACGGACCGGCTGAGTGCAAGGGCAATCGC
CTCCAGAGTTGCGTCATCAACAGCACCGCAAACCAGGCGGCGCAGGTTAA
ATTCGTGGTGTGCCAGATGCTAGCTCCGGATTATTCCCGCATTGATCAGT
GTGCCAATGAGGCAGGCCTGCTCACCGATGTGGTCCACTGCCTGTCCAGC
GAGACGGGCACCAAATTGCAGCTGCAGGCGGAGCTGGTGACCAAACAGTA
CAGCCCGAGCTTCATTCCCACCATCGTCTACAATGGCGTCTTCGATCAGC
AGCTGCAGGACCATTCGCTGCGCGATTTCCGCGGCACGGTTTGTTATATG
TTGCGTCAACAAAACTTGCTGCCCAGCAGCAGCACAATCTGCCAGGCAAG
CTTTCTAGACCAT
FMO14084.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:07:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9427-RB | 719 | CG9427-RB | 16..651 | 10..645 | 3180 | 100 | Plus |
| CG9427-RA | 847 | CG9427-RA | 241..779 | 107..645 | 2695 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:07:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9625669..9625961 | 399..107 | 1465 | 100 | Minus |
| 3R | 32079331 | 3R | 9625425..9625567 | 539..397 | 715 | 100 | Minus |
| 3R | 32079331 | 3R | 9625225..9625332 | 645..538 | 540 | 100 | Minus |
| 3R | 32079331 | 3R | 9626817..9626915 | 108..10 | 495 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:07:12 has no hits.
FMO14084.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:23:41 Download gff for
FMO14084.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9427-RB | 16..651 | 10..645 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:59:58 Download gff for
FMO14084.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9427-RB | 16..651 | 10..645 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:59:58 Download gff for
FMO14084.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9626817..9626915 | 10..108 | 100 | | Minus |
| 3R | 9625669..9625959 | 109..399 | 100 | <- | Minus |
| 3R | 9625225..9625332 | 538..645 | 100 | <- | Minus |
| 3R | 9625427..9625564 | 400..537 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:23:41 Download gff for
FMO14084.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5450947..5451054 | 538..645 | 100 | <- | Minus |
| arm_3R | 5451149..5451286 | 400..537 | 100 | <- | Minus |
| arm_3R | 5451391..5451681 | 109..399 | 100 | <- | Minus |
| arm_3R | 5452539..5452637 | 10..108 | 100 | | Minus |
