FMO14085.5prime Sequence
459 bp (459 high quality bases) assembled on 2014-01-10
> FMO14085.5prime
CTGCCTAATACCTTTCGCAGCACTAGGACCACCAGAACCACTACTACAAC
AACCACAAACTCCTCCACCAGCTCAACGACAAACTCGGCGCTGCCATCCC
GAATCCCAAAGCAACAGAACTACGTCTCCGACATTAGCTCACCCTTGATC
CAGGATGAGGGCGATAACAAAGTGCTGAAGCTGCGTTTCGATGTCAGCCA
GTATGCGCCCGAGGAAATTGTTGTGAAAACCGTCGACCAGAAGCTATTGG
TGCACGCCAAGCACGAGGAGAAGTCGGACACAAAGAGCGTGTACAGGGAG
TACAATCGGGAGTTCCTGCTGCCCAAGGGCGTCAATCCCGAGTCCATCCG
CTCGTCCCTCAGCAAGGACGGAGTCCTGACCGTGGACGCCCCCCTGCCAG
CACTCACCGCCGGCGAGACACTGATTCCCATTGCGCACAAGGCAAGCTTT
CTAGACCAT
FMO14085.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:08:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14207-RC | 753 | CG14207-RC | 53..487 | 7..441 | 2175 | 100 | Plus |
| CG14207-RD | 1380 | CG14207-RD | 477..854 | 64..441 | 1890 | 100 | Plus |
| CG14207-RA | 1240 | CG14207-RA | 477..854 | 64..441 | 1890 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:08:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19610695..19610887 | 249..441 | 965 | 100 | Plus |
| X | 23542271 | X | 19610525..19610625 | 151..251 | 505 | 100 | Plus |
| X | 23542271 | X | 19610378..19610463 | 69..154 | 430 | 100 | Plus |
| X | 23542271 | X | 19610190..19610254 | 7..71 | 325 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:08:21 has no hits.
FMO14085.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:23:57 Download gff for
FMO14085.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14207-RC | 47..492 | 1..446 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:00:16 Download gff for
FMO14085.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14207-RC | 47..492 | 1..446 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:00:16 Download gff for
FMO14085.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19610184..19610254 | 1..71 | 97 | -> | Plus |
| X | 19610381..19610462 | 72..153 | 100 | -> | Plus |
| X | 19610528..19610623 | 154..249 | 100 | -> | Plus |
| X | 19610696..19610892 | 250..446 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:23:57 Download gff for
FMO14085.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19504217..19504287 | 1..71 | 97 | -> | Plus |
| arm_X | 19504414..19504495 | 72..153 | 100 | -> | Plus |
| arm_X | 19504561..19504656 | 154..249 | 100 | -> | Plus |
| arm_X | 19504729..19504925 | 250..446 | 98 | | Plus |
