Clone FMO14088 Report

Search the DGRC for FMO14088

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:140
Well:88
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG43168-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO14088.5prime Sequence

279 bp (279 high quality bases) assembled on 2014-01-10

> FMO14088.5prime
TCAGTCGACATGAGCGGGTCGAATCCGTCCAATTCCAGGAGGGCCAATTA
TCGCAATACCTTGGATCCGGATATGGTTAGCAGAATCGAGCAACTCGAGC
AGTTACTGGAGACCGAAAAACGGAAGTATCATCAATTGTCCATGGATCGA
CTTTTAAATTACAAATTGGATCGGGATAACCTGCCGGAGGATACTCCGTT
GCCAATATACCTGGCCCATCGGGAGCCCAGAAGTTTGAGTCCACCAAGCC
GGTGGGACGCCGCAAGCTTTCTAGACCAT

FMO14088.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:08:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG43168-RA 1078 CG43168-RA 41..292 10..261 1260 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:08:42
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6275827..6276078 10..261 1260 100 Plus
Blast to na_te.dros performed on 2014-11-29 00:08:44 has no hits.

FMO14088.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:23:59 Download gff for FMO14088.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43168-RA 32..295 1..265 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:00:20 Download gff for FMO14088.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43168-RA 32..295 1..265 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:00:20 Download gff for FMO14088.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 6275818..6276081 1..265 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:23:59 Download gff for FMO14088.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6268918..6269181 1..265 97   Plus