FMO14090.5prime Sequence
306 bp (306 high quality bases) assembled on 2014-01-10
> FMO14090.5prime
TCAGTCGACATGGCGGATGTCCTGGAGAAAAGCTCACTGCTGGATGCTGT
GCCACCACTAGGCGACCCCCACCCACCGCTGCCCCACCAGCAGCTGCAAC
AGGAAGCAGCAGCAGCAGCAGCAGCAAATGCCGCACCACCAGCACCACCG
CAGCAGCAACAACCACCACCCCATCAGCTGCAGCAGCAGCAGCCGCAACA
ACAGCAACTGCAACAGAAGCCAGCAAATGCGAGGGCTAATCAGGATCAAA
AAGAATCGTCAGGAAATCAAACTAATTCAGTCCTAGAGGCAAGCTTTCTA
GACCAT
FMO14090.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:09:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tau-RE | 1343 | CG45110-RE | 347..625 | 10..288 | 1395 | 100 | Plus |
| tau-RM | 2261 | CG45110-RM | 366..610 | 10..254 | 1225 | 100 | Plus |
| tau-RJ | 2084 | CG45110-RJ | 366..610 | 10..254 | 1225 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:08:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 27656206..27656449 | 253..10 | 1220 | 100 | Minus |
| 3R | 32079331 | 3R | 27651572..27651610 | 288..250 | 195 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:08:59 has no hits.
FMO14090.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:24:01 Download gff for
FMO14090.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tau-RE | 342..629 | 5..293 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:00:26 Download gff for
FMO14090.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tau-RE | 342..629 | 5..293 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:00:26 Download gff for
FMO14090.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 27651568..27651606 | 254..293 | 95 | <- | Minus |
| 3R | 27656206..27656454 | 5..253 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:24:01 Download gff for
FMO14090.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 23477290..23477328 | 254..293 | 95 | <- | Minus |
| arm_3R | 23481928..23482176 | 5..253 | 99 | | Minus |
