Clone FMO14091 Report

Search the DGRC for FMO14091

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:140
Well:91
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG43445-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO14091.5prime Sequence

219 bp (219 high quality bases) assembled on 2014-01-10

> FMO14091.5prime
TCAGTCGACATGCTGCCATCCACAGAGGTCCTCCGGCGATGGCGTGTATC
TTGTATCTGCAGATGCAGTACGGCCTGCAACAACAGCGTCAACGTGGCAT
GCAAAATTGATGGTTTCGTTGGATGTTTGGGTTGGGTTGTGGGGATTAAG
TGGCTGCTTTATGGGCGACCAAGGAGCAGGACATCCAGGGAGCTAAAAAC
GGCAAGCTTTCTAGACCAT

FMO14091.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:09:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG43445-RA 598 CG43445-RA 270..461 10..201 960 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:09:02
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17911766..17911908 59..201 715 100 Plus
3R 32079331 3R 17911645..17911694 10..59 250 100 Plus
Blast to na_te.dros performed 2014-11-29 00:09:03
Subject Length Description Subject Range Query Range Score Percent Strand
Doc 4725 Doc DMW1DOC 4725bp Derived from X17551 (g8821) (Rel. 29, Last updated, Version 2). 1729..1805 150..75 103 61 Minus

FMO14091.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:24:03 Download gff for FMO14091.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43445-RA 270..461 10..201 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:00:31 Download gff for FMO14091.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43445-RA 270..461 10..201 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:00:31 Download gff for FMO14091.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 17911767..17911908 60..201 100   Plus
3R 17911645..17911694 10..59 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:24:03 Download gff for FMO14091.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 13737367..13737416 10..59 100 -> Plus
arm_3R 13737489..13737630 60..201 100   Plus