FMO14094.5prime Sequence
444 bp (444 high quality bases) assembled on 2014-01-10
> FMO14094.5prime
TCAGTCGACATGGCAAAACTTCAAGAGGATCCACCTACGGGTGTCTCGGG
TGCTCCAACAGATAATAATATTATGATATGGAATGCTGTGATTTTTGGTC
CACACGACACACCCTTCGAAGACGGAACATTTAAGTTAACCATAGAATTT
ACGGAAGAGTACCCAAACAAACCGCCAACGGTTCGATTTGTATCGAAAGT
ATTTCATCCCAATGTATACGCAGATGGTGGAATATGCTTGGACATATTGC
AGAACCGCTGGAGTCCCACGTACGATGTGTCAGCCATATTAACATCCATA
CAGTCACTGCTGAGCGATCCCAATCCCAACTCACCGGCTAACTCCACCGC
CGCCCAGCTGTATAAAGAAAATCGGCGCGAGTACGAGAAGCGTGTGAAAG
CCTGCGTTGAGCAGAGTTTCATCGATGCAAGCTTTCTAGACCAT
FMO14094.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:04:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ubc6-RC | 1142 | CG2013-RC | 231..639 | 18..426 | 2045 | 100 | Plus |
| Ubc6-RA | 2166 | CG2013-RA | 231..639 | 18..426 | 2045 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:04:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4950467..4950752 | 303..18 | 1430 | 100 | Minus |
| 3R | 32079331 | 3R | 4950282..4950407 | 426..301 | 630 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:04:08 has no hits.
FMO14094.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:21:57 Download gff for
FMO14094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| UbcD6-RE | 34..461 | 1..432 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:58:08 Download gff for
FMO14094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ubc6-RA | 227..643 | 15..432 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:58:08 Download gff for
FMO14094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4950278..4950404 | 304..432 | 97 | <- | Minus |
| 3R | 4950467..4950760 | 8..303 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:21:57 Download gff for
FMO14094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 776000..776126 | 304..432 | 97 | <- | Minus |
| arm_3R | 776189..776482 | 8..303 | 98 | | Minus |
