FMO14096.5prime Sequence
288 bp (288 high quality bases) assembled on 2014-01-10
> FMO14096.5prime
TCAGTCGACATGACATCACGGACGCGCCACTGTGCCCGACTGGGGATCGT
TCTCCTTGGGATCTGTTGCATCGCCAGCGGAATTTACCTCTTCCGCAACT
GGATCGATATGTTTACACGCATGCGCGGCCAGACCTTTGGGTTAAGTTTC
GCAAGCCGGCAAATTGGCAATGTGTGCAGAGGTCAACTGGGAGACTCATT
TGCATACCACTTGGATTGGGAGGCAACAATTTTTTCCATTGATTTAAAGC
AAAGACGAACGCAAAGACACGCAAGCTTTCTAGACCAT
FMO14096.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:08:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pes-RE | 519 | CG7228-RE | 101..361 | 10..270 | 1305 | 100 | Plus |
| pes-RF | 2532 | CG7228-RF | 101..223 | 10..132 | 615 | 100 | Plus |
| pes-RH | 2653 | CG7228-RH | 222..344 | 10..132 | 615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:08:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7991122..7991262 | 270..130 | 705 | 100 | Minus |
| 2L | 23513712 | 2L | 7991358..7991480 | 132..10 | 615 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:08:11 has no hits.
FMO14096.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-10 11:23:56 Download gff for
FMO14096.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pes-RE | 94..369 | 2..278 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:00:16 Download gff for
FMO14096.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pes-RE | 94..369 | 2..278 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:00:16 Download gff for
FMO14096.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7991114..7991259 | 133..278 | 97 | <- | Minus |
| 2L | 7991358..7991487 | 2..132 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-10 11:23:56 Download gff for
FMO14096.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7991114..7991259 | 133..278 | 97 | <- | Minus |
| arm_2L | 7991358..7991487 | 2..132 | 96 | | Minus |
