Clone FMO14101 Report

Search the DGRC for FMO14101

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:141
Well:1
Vector:pMK33-CFH-BD
Associated Gene/TranscriptJon66Cii-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO14101.5prime Sequence

813 bp (813 high quality bases) assembled on 2014-07-11

> FMO14101.5prime
TCAGTCGACATGAAAGCATTCATAGCTATCCTGGCTTTGGCTGTGGCCTC
GGCCTCTGGCGCCACCATGCCCCGTTTGGCCACCGAGAAACTGACCCCGG
TCCACACCAAGGACATGCAGGGTCGCATCACCAACGGCTATCCGGCTGAG
GAGGGCAAGGCTCCCTACACCGTCGGTCTGGGCTTCAGCGGCGGCTGGTG
GTGCGGTGGTTCGATCATCGCACACGATTGGGTGCTCACCGCCGAGCACT
GCATCGGAGATGCTGACTCCGTAACTGTCTACTTCGGAGCCACCTGGCGC
ACCAACGCCCAGTTCACCCACTGGGTTGGCAACGGTAACTTTATCAAGCA
CTCATCCGCCGATATTGCCCTCATCCGCATTCCCCACGTGGACTTCTGGC
ACATGGTGAACAAGGTGGAGCTGCCCAGCTACAACGATCGCTACAACGAC
TACAACGAATGGTGGGCTGTTGCCTGCGGCTGGGGAGGCACCTATGACGG
CAGCCCACTGCCCGACTACCTGCAGTGTGTCGATCTCCAGATCATCCACA
ACTCCGAGTGCTCCGGATACTATGGAAGCGTGGGAGACAACATCCTCTGT
GTCAGGACTCCCGACGGCAAGTCCACCTGCGGTGGTGACTCCGGCGGCCC
CCTGGTCACCCATGACGGTACCAAGCTTGTGGGGGTCACCAACTTTGGTT
CCGTCGCCGGCTGCCAGTCGGGTGCTCCCGCTGGATTCCAGCGTGTCACC
TACCACCTGGACTGGATTCGCGACCATACCGGCATTGCTTACTACGCAAG
CTTTCTAGACCAT

FMO14101.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:21:39
Subject Length Description Subject Range Query Range Score Percent Strand
Jon66Cii-RA 830 CG7170-RA 2..789 8..795 3940 100 Plus
Jon66Ci-RA 838 CG7118-RA 119..798 119..795 2200 88.6 Plus
Jon25Biii-RA 827 CG8871-RA 120..795 119..794 1730 83.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:21:36
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8392861..8393648 795..8 3940 100 Minus
3L 28110227 3L 8391658..8392337 119..795 2145 88.3 Plus
2L 23513712 2L 4949973..4950648 794..119 1730 83.7 Minus
3R 32079331 3R 30487110..30487524 785..368 540 75.8 Minus
2L 23513712 2L 4954326..4954758 795..360 430 74.3 Minus
2L 23513712 2L 4954815..4955009 321..133 400 81.5 Minus
3L 28110227 3L 6053938..6054145 485..278 290 76 Minus
3L 28110227 3L 6052750..6052857 360..467 270 83.3 Plus
2L 23513712 2L 4952294..4952469 785..610 250 76.1 Minus
2L 23513712 2L 4952785..4952996 321..119 245 75.5 Minus
Blast to na_te.dros performed on 2014-11-29 00:21:37 has no hits.

FMO14101.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:36:09 Download gff for FMO14101.5prime
Subject Subject Range Query Range Percent Splice Strand
Jon66Cii-RA 2..792 8..799 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:59:44 Download gff for FMO14101.5prime
Subject Subject Range Query Range Percent Splice Strand
Jon66Cii-RA 2..792 8..799 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:59:44 Download gff for FMO14101.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 8392858..8393653 1..799 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:36:09 Download gff for FMO14101.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8385958..8386753 1..799 99   Minus