FMO14101.5prime Sequence
813 bp (813 high quality bases) assembled on 2014-07-11
> FMO14101.5prime
TCAGTCGACATGAAAGCATTCATAGCTATCCTGGCTTTGGCTGTGGCCTC
GGCCTCTGGCGCCACCATGCCCCGTTTGGCCACCGAGAAACTGACCCCGG
TCCACACCAAGGACATGCAGGGTCGCATCACCAACGGCTATCCGGCTGAG
GAGGGCAAGGCTCCCTACACCGTCGGTCTGGGCTTCAGCGGCGGCTGGTG
GTGCGGTGGTTCGATCATCGCACACGATTGGGTGCTCACCGCCGAGCACT
GCATCGGAGATGCTGACTCCGTAACTGTCTACTTCGGAGCCACCTGGCGC
ACCAACGCCCAGTTCACCCACTGGGTTGGCAACGGTAACTTTATCAAGCA
CTCATCCGCCGATATTGCCCTCATCCGCATTCCCCACGTGGACTTCTGGC
ACATGGTGAACAAGGTGGAGCTGCCCAGCTACAACGATCGCTACAACGAC
TACAACGAATGGTGGGCTGTTGCCTGCGGCTGGGGAGGCACCTATGACGG
CAGCCCACTGCCCGACTACCTGCAGTGTGTCGATCTCCAGATCATCCACA
ACTCCGAGTGCTCCGGATACTATGGAAGCGTGGGAGACAACATCCTCTGT
GTCAGGACTCCCGACGGCAAGTCCACCTGCGGTGGTGACTCCGGCGGCCC
CCTGGTCACCCATGACGGTACCAAGCTTGTGGGGGTCACCAACTTTGGTT
CCGTCGCCGGCTGCCAGTCGGGTGCTCCCGCTGGATTCCAGCGTGTCACC
TACCACCTGGACTGGATTCGCGACCATACCGGCATTGCTTACTACGCAAG
CTTTCTAGACCAT
FMO14101.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:21:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Jon66Cii-RA | 830 | CG7170-RA | 2..789 | 8..795 | 3940 | 100 | Plus |
Jon66Ci-RA | 838 | CG7118-RA | 119..798 | 119..795 | 2200 | 88.6 | Plus |
Jon25Biii-RA | 827 | CG8871-RA | 120..795 | 119..794 | 1730 | 83.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:21:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8392861..8393648 | 795..8 | 3940 | 100 | Minus |
3L | 28110227 | 3L | 8391658..8392337 | 119..795 | 2145 | 88.3 | Plus |
2L | 23513712 | 2L | 4949973..4950648 | 794..119 | 1730 | 83.7 | Minus |
3R | 32079331 | 3R | 30487110..30487524 | 785..368 | 540 | 75.8 | Minus |
2L | 23513712 | 2L | 4954326..4954758 | 795..360 | 430 | 74.3 | Minus |
2L | 23513712 | 2L | 4954815..4955009 | 321..133 | 400 | 81.5 | Minus |
3L | 28110227 | 3L | 6053938..6054145 | 485..278 | 290 | 76 | Minus |
3L | 28110227 | 3L | 6052750..6052857 | 360..467 | 270 | 83.3 | Plus |
2L | 23513712 | 2L | 4952294..4952469 | 785..610 | 250 | 76.1 | Minus |
2L | 23513712 | 2L | 4952785..4952996 | 321..119 | 245 | 75.5 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:21:37 has no hits.
FMO14101.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:36:09 Download gff for
FMO14101.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Jon66Cii-RA | 2..792 | 8..799 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:59:44 Download gff for
FMO14101.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Jon66Cii-RA | 2..792 | 8..799 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:59:44 Download gff for
FMO14101.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8392858..8393653 | 1..799 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:36:09 Download gff for
FMO14101.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8385958..8386753 | 1..799 | 99 | | Minus |