FMO14103.5prime Sequence
327 bp (327 high quality bases) assembled on 2014-07-11
> FMO14103.5prime
TCAGTCGACATGACCTATCAAACGGATACAATGCTGAAGTTGGTCGAAAA
GCTTTTCCAACTGTTGCGACCCAGGATGTGTCAGTTTTCACAATCCAACA
AGAACATATCCAAGCATTTGTTCGAAAAAGCCAGGGCGGAGGAGAACATA
CATTTCCTTAAACTGCAACGGGAACAGCTGAAGTCGTTGCGAGAAAAGAT
TCTCAGCCAGAAGAACGAAGTCACAACAAAGATCATCAAGGTGGATAAGC
AGATACAATCGTTGGAAAAAACCAAGACCGAAGGCTCACAGATGAACCAT
GAACAAAATGCAAGCTTTCTAGACCAT
FMO14103.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:21:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42560-RA | 880 | CG42560-RA | 556..855 | 10..309 | 1500 | 100 | Plus |
| CG42559-RA | 880 | CG42559-RA | 556..855 | 10..309 | 1500 | 100 | Plus |
| CG42560-RB | 410 | CG42560-RB | 100..385 | 24..309 | 1430 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:21:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23599551..23599695 | 309..165 | 725 | 100 | Minus |
| 2R | 25286936 | 2R | 23599879..23599957 | 102..24 | 395 | 100 | Minus |
| 2R | 25286936 | 2R | 23599757..23599820 | 165..102 | 320 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:21:44 has no hits.
FMO14103.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:36:12 Download gff for
FMO14103.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42559-RA | 556..858 | 10..313 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:59:47 Download gff for
FMO14103.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42559-RA | 556..858 | 10..313 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:59:47 Download gff for
FMO14103.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23599548..23599694 | 166..313 | 98 | <- | Minus |
| 2R | 23599757..23599820 | 102..165 | 100 | <- | Minus |
| 2R | 23599880..23599956 | 25..101 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:36:12 Download gff for
FMO14103.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19487071..19487217 | 166..313 | 98 | <- | Minus |
| arm_2R | 19487280..19487343 | 102..165 | 100 | <- | Minus |
| arm_2R | 19487403..19487479 | 25..101 | 100 | <- | Minus |
