FMO14105.5prime Sequence
321 bp (321 high quality bases) assembled on 2014-07-11
> FMO14105.5prime
TCAGTCGACATGGAGGAGGAGCGCGAGAAGATGAGGCAAGACATTCGCGA
TAAGTACAACATCAAGAAGAAGGAGGAGATCGTGGAGGCGGCCCCCCAAG
AAGAGCCCAATCCCCTGATGCGGAAAAAGAAGACGCCCGAGGAACTCGCC
GCCGAAGCGGAGCAGGAAGAGCTCGACGATTTTACAAGTAAGTCTTTGCT
GCCACTGTCAAGTGCCGTTGAACCTGGCTCAGCTAGTGGCATCTATATAC
TGCAATTGCAACCCACTAATTTCTCCGCTCCGATTGCTCCTGCTCCTATT
CTAGCAAGCTTTCTAGACCAT
FMO14105.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:21:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cpx-RAB | 9682 | CG32490-RB | 601..894 | 10..303 | 1470 | 100 | Plus |
| cpx-RZ | 2094 | CG32490-RZ | 655..948 | 10..303 | 1470 | 100 | Plus |
| cpx-RAA | 3803 | CG32490-RA | 449..626 | 10..187 | 890 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:21:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4295566..4295816 | 53..303 | 1255 | 100 | Plus |
| 3R | 32079331 | 3R | 4295242..4295286 | 10..54 | 225 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:21:51 has no hits.
FMO14105.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:36:14 Download gff for
FMO14105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cpx-RZ | 425..723 | 10..310 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:59:51 Download gff for
FMO14105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cpx-RZ | 655..953 | 10..310 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:59:51 Download gff for
FMO14105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4295568..4295821 | 55..308 | 98 | -> | Plus |
| 3R | 4295242..4295286 | 10..54 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:36:14 Download gff for
FMO14105.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 120964..121008 | 10..54 | 100 | -> | Plus |
| arm_3R | 121290..121543 | 55..308 | 98 | -> | Plus |
