FMO14109.5prime Sequence
345 bp (345 high quality bases) assembled on 2014-07-11
> FMO14109.5prime
TCAGTCGACATGAGTTCCAAGTCCCTTTTCGACAGCGAGGAGGATGCCGC
TCAGGCCAACAAATTATCCAGGAAAGCAAAGGAATCGCCCTTCATGCTTG
TGGGTGAGTTTTGCCAATTTCCGGACAGCGAAAGTTTTGCCGCCGTGACG
TCACATGGAAACTTTTGGCTCAGCAGCCAGCTAGATACGCACATATCTAC
ACACATTTACGAATGTACATTGCGTGTGCGGCGGGGAAGTCGGCTAATCT
TGACCTTGGCCATGAGTTTAACGTCAATTTGGGGTCACTTTTTGATGTCA
CTGTGTGACATAACGGTGAATGCAGTAGCAAGCTTTCTAGACCAT
FMO14109.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:22:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17734-RC | 1317 | CG17734-RC | 125..442 | 10..327 | 1590 | 100 | Plus |
| CG17734-RB | 1024 | CG17734-RB | 125..220 | 10..105 | 480 | 100 | Plus |
| CG17734-RA | 764 | CG17734-RA | 125..220 | 10..105 | 480 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:22:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11243558..11243875 | 327..10 | 1590 | 100 | Minus |
| 2R | 25286936 | 2R | 10420908..10421003 | 105..10 | 210 | 81.2 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:22:03 has no hits.
FMO14109.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:36:21 Download gff for
FMO14109.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17734-RC | 117..442 | 1..327 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:59:59 Download gff for
FMO14109.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17734-RC | 117..442 | 1..327 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:59:59 Download gff for
FMO14109.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11243558..11243883 | 1..327 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:36:21 Download gff for
FMO14109.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7069280..7069605 | 1..327 | 98 | | Minus |
