FMO14119.5prime Sequence
384 bp (384 high quality bases) assembled on 2014-07-11
> FMO14119.5prime
TCAGTCGACATGTTCAAAAACCACTTGGAAATGATTGGGCGCAATGAGAG
CCCCAGCAAGAAGGCGAAATTCTGGCAGTCCTACATCAGGTCCCTGAAGG
GCTCCGAGGATATCCGTGCCCACGAGGCGCCCCGTGCCTCTCGTCCCTAC
AGCTCCTACCTGGACTCGCCCTCCTACAGGAGCATCTATGACGAGCCCGC
CACCGCCAATGAGCGCGTCCAGTCCTCTGGCTACAGATATCTGCCAGTGA
GCCGCGACACCTACGGCTACTCGCCCCGTGCCATCTACGATCATCACTAC
AGCCGAACAAGTAAGTTGGTACCATATACGGACCACATACTGTACTATCT
ACAGCCGATTCCCGCCGCAAGCTTTCTAGACCAT
FMO14119.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:22:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mf-RP | 2827 | CG6803-RP | 85..441 | 10..366 | 1785 | 100 | Plus |
| Mf-RK | 2535 | CG553-RK | 85..441 | 10..366 | 1785 | 100 | Plus |
| Mf-RO | 1777 | CG6803-RO | 115..419 | 10..314 | 1510 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:22:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15178224..15178490 | 366..100 | 1335 | 100 | Minus |
| 3R | 32079331 | 3R | 15179038..15179129 | 101..10 | 460 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:22:34 has no hits.
FMO14119.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:36:36 Download gff for
FMO14119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mf-RK | 76..449 | 1..377 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:00:17 Download gff for
FMO14119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mf-RK | 76..449 | 1..377 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:00:17 Download gff for
FMO14119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15179039..15179138 | 1..100 | 96 | | Minus |
| 3R | 15178216..15178489 | 101..377 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:36:36 Download gff for
FMO14119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11003938..11004211 | 101..377 | 98 | <- | Minus |
| arm_3R | 11004761..11004860 | 1..100 | 96 | | Minus |
