FMO14120.5prime Sequence
435 bp (313 high quality bases) assembled on 2014-07-11
> FMO14120.5prime
TCAGTCGACATGTGGTTACAGTGCGCGAGGAAACCAATACGTGCAGACTT
TTGGCTGCAGCTGCTCTGCGTGAGTTTTACACTCTTTCACCTGGAATTCG
CCGCGGCCCAAAATGCGGGAGTGGTGGCAGCTGCCGTGGCGGCTGGACAA
AACCAAACGCAGGTCTATGTGACGGATTCTTGCCTGCAAAAGCCGTACCG
CTGTCCTCATCCGAAGATCCAGTTCTATTTGTACACGAGACGCACCCAGG
AGCAGCCGGAGTTCATAGATGTCCTGGATCCCGAACGCCCTGTACTACAC
GCACTTCAATCCACGGCCTCCCACCAAGATCTTAATCCATGGATTCGGCG
GCGGCAGGAACTTGAATCCCAGCCCAACTGGGGGAGGCCTATTTCGTGGG
GGCCAATCAAACACATCTAAGGGACACCCCGAATG
FMO14120.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:22:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18641-RC | 1790 | CG18641-RC | 421..816 | 10..403 | 1720 | 96.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:22:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2411759..2412027 | 372..103 | 1195 | 97 | Minus |
| 2L | 23513712 | 2L | 2414809..2414902 | 103..10 | 470 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:22:38 has no hits.
FMO14120.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:36:38 Download gff for
FMO14120.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18641-RC | 421..785 | 10..375 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:00:18 Download gff for
FMO14120.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18641-RC | 421..785 | 10..375 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:00:18 Download gff for
FMO14120.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2411755..2412026 | 104..375 | 97 | <- | Minus |
| 2L | 2414809..2414902 | 10..103 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:36:38 Download gff for
FMO14120.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2411755..2412026 | 104..375 | 97 | <- | Minus |
| arm_2L | 2414809..2414902 | 10..103 | 100 | | Minus |
