FMO14122.5prime Sequence
785 bp (778 high quality bases) assembled on 2014-07-11
> FMO14122.5prime
TCAGTCGACATGCCCAGCACGGCGGGCAGTGCAGCTGGCGTTGGTATGGG
CGCCCTGATCAACAGTGCCGGCAGCAGCGCCAGTAGTGTCATGGGCATTG
GCATGGGCAGAGCAGCTGCTACGGGAGCAGGAGCACCAGGCAGTTCGGGA
TCTGGAGCAGATGCCTCCGCCGCCGGCACTTTAATCGCCCAGAGCACGGC
GGGAACGAGCGCCGCCAGCAGTGGAACGATCACCTGGGACAACAATGGAA
CCCTGCGATCGATCAATCCCGGCGATTGGTCCATCGAACAGTGCCTCGGG
CCACATCACCTGTACTTTCAGCTCGGCTGGGCCTTTCTCTTCCTAGCCTT
TTTGGCTCCACACGGTCCCTACGGCGCCCTGTGGATGCGTGCCATGCTGC
TCATTGGCTGCCTGATGATGGGCATGCATGGCTACTTGGTGGCCTTTGCA
CCGGACGTCATCCTGTGGTCGGGCATGGGACTTTTTGTCAACTTCATCTA
TCTCGTCGTGGTGCTATGCCGGCTGAGGCCTGTGCGATTCGAGCAGGAAA
TCGAAGCGGTCTACCTGGCACTTTTCCAGCCGCTGCACGTGACGCGCCAC
CAGTTCAAGAAGGTGCTCAACTGCATGAAAGGTGATACGTGCCCTGAAGT
ACCCAGGAGGTCTACGCCCAAGAGAAGGTCACCAATGGTCGACAGCCTGT
CGCTGGTGCTGAGCGGCAAACTGGTTGTAGTCGCAGCATCAGCGCGCCCT
GCACCATTGTGTTTCCCCATCAGTTTCTAGACTCG
FMO14122.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:22:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| bves-RD | 3428 | CG32513-RD | 715..1485 | 10..785 | 3710 | 99 | Plus |
| bves-RC | 3461 | CG32513-RC | 715..1485 | 10..785 | 3710 | 99 | Plus |
| bves-RB | 3789 | CG32513-RB | 715..1485 | 10..785 | 3710 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:22:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21061009..21061559 | 10..560 | 2755 | 100 | Plus |
| X | 23542271 | X | 21075364..21075522 | 558..719 | 645 | 97.5 | Plus |
| X | 23542271 | X | 21075601..21075655 | 730..785 | 215 | 96.4 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:22:07 has no hits.
FMO14122.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:36:23 Download gff for
FMO14122.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bves-RB | 707..1485 | 1..785 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:00:00 Download gff for
FMO14122.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bves-RB | 707..1485 | 1..785 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:00:00 Download gff for
FMO14122.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21075365..21075522 | 559..719 | 97 | -> | Plus |
| X | 21075592..21075655 | 720..785 | 93 | | Plus |
| X | 21061001..21061557 | 1..558 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:36:23 Download gff for
FMO14122.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20932028..20932584 | 1..558 | 99 | -> | Plus |
| arm_X | 20946392..20946549 | 559..719 | 97 | -> | Plus |
| arm_X | 20946619..20946682 | 720..785 | 93 | | Plus |
