FMO14126.5prime Sequence
420 bp (420 high quality bases) assembled on 2014-07-11
> FMO14126.5prime
TCAGTCGACATGAAAGTATTCTTTGTGTTTGCCGCCCTTGCAGCTCTATC
TTTGGCATCTGCCGGGCTAACTGATTCCCAAAAGGCTGAGGCAAAGCAGA
GAGCCAAGGCCTGCGTCAAACAGGAGGGAATCACGAAGGAGCAAGCTATT
GCCCTGCGGTCTGGAAACTTTGCAGACTCCGATCCAAAGGTAAAGTGCTT
CGCCAACTGCTTCCTGGAGCAGACCGGCCTGGTGGCCAATGGGCAGATAA
AACCTGACGTGGTTTTGGCCAAACTAGGTCCCATCGCCGGCGAAGCCAAT
GTCAAGGAGGTGCAGGCCAAGTGTGACTCGACCAAGGGAGCCGACAAGTG
CGACACTAGCTATCTGCTGTACAAGTGCTACTACGAAAACCACGCCCAAT
TCGCAAGCTTTCTAGACCAT
FMO14126.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:23:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp56e-RB | 529 | CG8462-RB | 52..445 | 9..402 | 1970 | 100 | Plus |
| Obp56e-RA | 532 | CG8462-RA | 52..448 | 9..402 | 1930 | 99.2 | Plus |
| Obp56d-RB | 922 | CG11218-RB | 277..554 | 121..398 | 250 | 72.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:22:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19712510..19712848 | 64..402 | 1695 | 100 | Plus |
| 2R | 25286936 | 2R | 19712396..19712451 | 9..64 | 280 | 100 | Plus |
| 2R | 25286936 | 2R | 19703292..19703569 | 398..121 | 250 | 72.7 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:22:59 has no hits.
FMO14126.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:36:46 Download gff for
FMO14126.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp56e-RB | 45..449 | 1..407 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:00:40 Download gff for
FMO14126.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp56e-RB | 45..449 | 1..407 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:00:40 Download gff for
FMO14126.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19712389..19712450 | 1..63 | 95 | -> | Plus |
| 2R | 19712510..19712852 | 64..407 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:36:46 Download gff for
FMO14126.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15599894..15599955 | 1..63 | 95 | -> | Plus |
| arm_2R | 15600015..15600357 | 64..407 | 99 | | Plus |
