FMO14127.5prime Sequence
570 bp (570 high quality bases) assembled on 2014-07-11
> FMO14127.5prime
TCAGTCGACATGGATCCACATAGTGCGGACAACTGCAAGTGCCACAAGCA
GACGCAGCCGGCACAGCAGACGTTAAGCGACATGGACTTCGATCGAGGCA
TTTGGAATGCAGCTATCTATAACGAAGTGGAGCGTGTAAGAGAGTTTATC
AAGAAGGGCCAGTCGATGGCTCGCGATGACTGCGACTATACGGCTCTGCA
CTATGCGGCCCGCAATGGGAACGAGCCCATCTGCAAGCTGCTTCTCGACG
AGGGCAAGGCAGACGTGAATGCTGTGACCAAAGCAGGAGCCACCGCGCTG
CATCGTGCAGCCATGATGGGCCACTTGGAAATCGTGAAGCTACTGGTCGA
GCACAAGGCTAATCTTCTGCTGCAGGACGAGAGCGGACAGACCGCTTTGC
ATCGAGCAGTGATGCGGGGCCACCTGGAGGTGTGTCGCATTCTGCTGGCA
AAGGAGCCAACACTTAAGCTGGTCAAGGATAAAAAGGACAAAATTGCATT
TGAGTACATCATGGAGAACGCCAATGATGATTTTAAGCTGCTGCTGAAGC
CCGCAAGCTTTCTAGACCAT
FMO14127.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:23:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG44001-RE | 2431 | CG44001-RE | 1299..1841 | 10..552 | 2715 | 100 | Plus |
| CG44001-RD | 2415 | CG44001-RD | 1283..1825 | 10..552 | 2715 | 100 | Plus |
| CG44001-RC | 2281 | CG44001-RC | 1149..1691 | 10..552 | 2715 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:23:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5047542..5047775 | 319..552 | 1170 | 100 | Plus |
| 2L | 23513712 | 2L | 5047271..5047480 | 111..320 | 1050 | 100 | Plus |
| 2L | 23513712 | 2L | 5047104..5047206 | 10..112 | 515 | 100 | Plus |
Blast to na_te.dros performed 2014-11-29 00:23:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dbif\P-element_O | 2986 | Dbif\P-element_O P_O 2986bp Derived from X71634. | 1447..1530 | 516..438 | 110 | 64.3 | Minus |
FMO14127.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:36:47 Download gff for
FMO14127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG44001-RC | 1149..1696 | 10..557 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:00:43 Download gff for
FMO14127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG44001-RC | 1149..1696 | 10..557 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:00:43 Download gff for
FMO14127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5047104..5047206 | 10..112 | 100 | -> | Plus |
| 2L | 5047273..5047479 | 113..319 | 100 | -> | Plus |
| 2L | 5047543..5047780 | 320..557 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:36:47 Download gff for
FMO14127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5047104..5047206 | 10..112 | 100 | -> | Plus |
| arm_2L | 5047273..5047479 | 113..319 | 100 | -> | Plus |
| arm_2L | 5047543..5047780 | 320..557 | 99 | | Plus |
