FMO14128.5prime Sequence
444 bp (444 high quality bases) assembled on 2014-07-11
> FMO14128.5prime
TCAATCGACATGTCCTGGTCAAGTGCACTAATCAAAGATATCTCGAAACC
AGAAAATTTGATCATTTCGTCAGAAATCGCAGTGGTCATAGCAGACAAGT
TTCCCAAGGCGCAGCATCACTACTTGGTGCTACCATTGGCCGACATTCCC
AGCATCTTTCACTTGAACCGGAGCCATCTGTCGCTTTTGGAGGAGCTGCA
TCTGCTGGCCAGGAACGTTGTGGAAGTGAAAGGAGTCCGGTGGCAGGACT
TCAACGTGGGATTTCACGCGGAGCCGAGCATGCAAAGGCTCCACCTGCAC
GTCATCTCCAAGGACTTCGTATCAACAAGCCTGAAGACCAAGAAGCATTG
GAACTCATTCAACACCGAGCTGTTTGTGCCCTACACAAGTAAGGCTATTA
GAACACGGCGCAGGCTACAGGCTTCAGCAAGCTTTCTAGACCAT
FMO14128.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:23:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5316-RA | 2610 | CG5316-RA | 203..619 | 10..426 | 2085 | 100 | Plus |
| CG5316-RB | 2483 | CG5316-RB | 203..581 | 10..388 | 1895 | 100 | Plus |
| CG5316-RC | 2376 | CG5316-RC | 96..474 | 10..388 | 1895 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:23:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19403893..19404156 | 163..426 | 1320 | 100 | Plus |
| 3R | 32079331 | 3R | 19403670..19403822 | 10..162 | 765 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:23:05 has no hits.
FMO14128.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:36:48 Download gff for
FMO14128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5316-RA | 195..624 | 2..432 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:00:49 Download gff for
FMO14128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5316-RA | 195..624 | 2..432 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:00:49 Download gff for
FMO14128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19403662..19403822 | 2..162 | 97 | -> | Plus |
| 3R | 19403893..19404161 | 163..432 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:36:48 Download gff for
FMO14128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 15229384..15229544 | 2..162 | 97 | -> | Plus |
| arm_3R | 15229615..15229883 | 163..432 | 98 | | Plus |
