FMO14129.5prime Sequence
504 bp (504 high quality bases) assembled on 2014-07-11
> FMO14129.5prime
TCAGTCGACATGACCGACCTCAACGAGCTGATGGGATCCCCTTTTGTGCG
TGTGAAGCTTGTGGCCTTTGTGCACTTCTTCTTCATCTCGAATGCCATGC
TTGGCAGTTGGGGCCACGGGGCGTATGAATTCTACAACTTTCTATTCCTG
ATCGCCATGTTCTGGTCGATGCACAGCAAGGACTCCGTCGAAGCGATTCA
AACGGCGCTCGTCATCAACGCTTCTAGCATTTTTTTTGATATAGTCAGCA
TTTCTCTTCATTTCGGCATTATGAATGGCTGGGCCGTTGCGTTCAGCATC
ATCAATCTGATACTGCGACCGGTGAGCGTGGCCCTGCTCTACAAGGAGTT
CAACACGAGGGGCGGCACACTGCCGACGGGATCGGTCTTCCCAACTAGCC
AGCAGCGCAGCTATCAGGACATCGATCGGCCCACACAGCCCACACCGACC
AATTCGCAGCCCGGTCCGAATGTGGCCAGCATTTTCGCAAGCTTTCTAGA
CCAT
FMO14129.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:23:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32638-RB | 1573 | CG32638-RB | 496..973 | 9..486 | 2375 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:23:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13123476..13123687 | 486..275 | 1045 | 99.5 | Minus |
| X | 23542271 | X | 13126067..13126216 | 205..56 | 750 | 100 | Minus |
| X | 23542271 | X | 13123774..13123844 | 274..204 | 355 | 100 | Minus |
| X | 23542271 | X | 13128251..13128299 | 57..9 | 245 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:23:10 has no hits.
FMO14129.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:36:50 Download gff for
FMO14129.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32638-RB | 489..982 | 1..496 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:00:53 Download gff for
FMO14129.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32638-RB | 489..982 | 1..496 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:00:53 Download gff for
FMO14129.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13123467..13123687 | 275..496 | 97 | <- | Minus |
| X | 13123774..13123843 | 205..274 | 100 | <- | Minus |
| X | 13126068..13126214 | 58..204 | 100 | <- | Minus |
| X | 13128251..13128303 | 1..57 | 92 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:36:50 Download gff for
FMO14129.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13017500..13017720 | 275..496 | 97 | <- | Minus |
| arm_X | 13017807..13017876 | 205..274 | 100 | <- | Minus |
| arm_X | 13020101..13020247 | 58..204 | 100 | <- | Minus |
| arm_X | 13022284..13022336 | 1..57 | 92 | | Minus |
