FMO14130.5prime Sequence
222 bp (222 high quality bases) assembled on 2014-07-11
> FMO14130.5prime
TCAGTCGACATGGTTGACCTCACCGACGCCGGCTCGCCGTTCCAGCAATC
CATTCCCGACTTCGCCTTCTACGTGCCGGCAATTGTTGTTTTTACCCTGG
CAGCTCTCTTTGGCTACAAGCTGTACAAATCCCTGACGGAAAAGGAGCTC
AAGAAGCAGGAGAAACTGAAGAGCAAGCAACAGAAGAAGGCCAAGAAGTC
AAACGCAAGCTTTCTAGACCAT
FMO14130.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:23:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42336-RB | 509 | CG42336-RB | 164..360 | 8..204 | 985 | 100 | Plus |
| CG42336-RD | 707 | CG42336-RD | 455..558 | 101..204 | 520 | 100 | Plus |
| CG42336-RF | 901 | CG42336-RF | 651..752 | 103..204 | 510 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:23:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11294685..11294788 | 204..101 | 520 | 100 | Minus |
| 2R | 25286936 | 2R | 11297262..11297357 | 103..8 | 480 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:23:13 has no hits.
FMO14130.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:36:52 Download gff for
FMO14130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42336-RB | 157..365 | 1..209 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:00:58 Download gff for
FMO14130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42336-RB | 157..365 | 1..209 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:00:58 Download gff for
FMO14130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11294680..11294785 | 104..209 | 98 | <- | Minus |
| 2R | 11297262..11297361 | 1..103 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:36:52 Download gff for
FMO14130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7182185..7182290 | 104..209 | 98 | <- | Minus |
| arm_2R | 7184767..7184866 | 1..103 | 96 | | Minus |
