FMO14132.5prime Sequence
945 bp (824 high quality bases) assembled on 2014-07-11
> FMO14132.5prime
TCAGTCGACATGGTGGGATCTCGAGTGTATGTGGGCGGTCTGCCCTACGG
AGTGCGCGAGCGCGATTTGGAGCGCTTTTTCAAAGGCTACGGCCGCACAC
GCGACATCCTCATCAAAAATGGCTACGGCTTTGTGGAATTCGAAGACTAT
CGTGATGCCGACGATGCCGTCTATGAACTGAATGGCAAAGAGCTGCTTGG
CGAACGTGTGGTTGTTGAACCCGCCAGGGGTACCGCTCGTGGCAGCAACC
GCGACCGCTACGACGATCGATATGGTGGTCGGCGGGGGGGCGGGGGCGGT
CGTTACAACGAAAAAAACAAAAATTCCAGATCATCCTCTCGTTATGGCCC
ACCGTTGCGCACTGAGTACCGACTGATTGTGGAGAATTTGTCTAGCCGCG
TTAGCTGGCAGGATCTCAAGGATTACATGCGCCAGGCTGGCGAGGTCACC
TATGCCGATGCCCACAAGCAGCGTCGCAATGAGGGCGTGGTTGAGTTCGC
CTCGTTGTCGGACATGAAGACGGCCATTGAGAAGTTGGATGACACCGAGC
TAAACGGCAGGCGGATCCACTTGGTCGAGGATCGTCGCGGAGGACGCAGC
GGTGGTGGCGGCGGCAGCGGACGTGGACGCTCCCGTTCGTCCAGCTCCCG
ATCGCGCTCCCGATCCCGCAGGCGTTCTCGCTCTCGCCGCTCGTCGCACT
CGCGCTCCAAGTCTCGCAGCCGCTCCAAATCTCGTGCGGACGCTCCAAGT
CCAAGTCGCCAGTCAGTCTCGTCTCGCTCCCGCTCGCGATCCACAATCGC
GTGACGTGTCCAAGTCCAAGTCAAGTCACTCTGCACGCTCCGTCGCCAAA
CGTGAGCGTGACTCCGTCCGATCGCGGTCGTCTGAAGAGCGGAGTCGTTT
CCCGCCCCAGTTCCAGTCATCCACCGGATTCCGTTTACGAATGAA
FMO14132.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:23:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| B52-RO | 1580 | CG10851-RO | 154..1092 | 9..926 | 4050 | 96.8 | Plus |
| B52-RM | 1590 | CG10851-RM | 164..1102 | 9..926 | 4050 | 96.8 | Plus |
| B52-RB | 1643 | CG10851-RB | 154..1092 | 9..926 | 4050 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:23:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13665589..13665900 | 485..793 | 1410 | 99 | Plus |
| 3R | 32079331 | 3R | 13661733..13661860 | 9..136 | 640 | 100 | Plus |
| 3R | 32079331 | 3R | 13662296..13662404 | 206..314 | 545 | 100 | Plus |
| 3R | 32079331 | 3R | 13662955..13663052 | 315..412 | 490 | 100 | Plus |
| 3R | 32079331 | 3R | 13665449..13665526 | 408..485 | 390 | 100 | Plus |
| 3R | 32079331 | 3R | 13662160..13662231 | 135..206 | 360 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:23:21 has no hits.
FMO14132.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:36:55 Download gff for
FMO14132.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| B52-RB | 149..1059 | 4..896 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:01:06 Download gff for
FMO14132.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| B52-RB | 149..1059 | 4..896 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:01:06 Download gff for
FMO14132.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13665453..13665526 | 412..485 | 100 | -> | Plus |
| 3R | 13661728..13661859 | 4..135 | 97 | -> | Plus |
| 3R | 13662161..13662231 | 136..206 | 100 | -> | Plus |
| 3R | 13662297..13662404 | 207..314 | 100 | -> | Plus |
| 3R | 13662955..13663051 | 315..411 | 100 | -> | Plus |
| 3R | 13665590..13665901 | 486..793 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:36:55 Download gff for
FMO14132.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9487450..9487581 | 4..135 | 97 | -> | Plus |
| arm_3R | 9487883..9487953 | 136..206 | 100 | -> | Plus |
| arm_3R | 9488019..9488126 | 207..314 | 100 | -> | Plus |
| arm_3R | 9488677..9488773 | 315..411 | 100 | -> | Plus |
| arm_3R | 9491175..9491248 | 412..485 | 100 | -> | Plus |
| arm_3R | 9491312..9491623 | 486..793 | 98 | -> | Plus |
