FMO14134.5prime Sequence
835 bp (835 high quality bases) assembled on 2014-07-11
> FMO14134.5prime
TCAGTCGACATGAAGGTTTTTGCTGTCTTGGTCTTGGCAATTGCCACAGT
TTCTGCTGATATCCTGCGCCAGGACACTCCAGTACATCCCCGTGATAGCT
CAGCTGTTCCGTCCATAGATGGTCGCATTACCAATGGAAACAAGGCAGCT
GCTAACCAGTTTCCCTACCAGGTGGGACTCAGTTTTAAAAGCTCGGCTGG
CAGTTGGTGGTGCGGTGGTTCAATAATAGCGAATACATGGGTACTAACTG
CTGCTCATTGCACCAAAGGAGCCTCTTCCGTGACCATCTACTATGGGTCC
ACCGTTCGCACTAGTGCCAAACTGAAGAAAAAGGTCTCCAGCTCCAAGTT
TGTGCAGCATGCCGGCTACAATGCGGCTACTTTGCGCAACGACATCTCCC
TGATCAAGACTCCATCCGTCACTTTTACGGTTTCCATAAATAAGATTGCC
CTGCCCGCCATCGCCAGCAGCTACTCCACCTACGCCGGACAGACTGCAGT
GGCTTCCGGATGGGGCAGGACCTCCGATTCCAGCATTGCCGTCGCCACGA
ACCTTCAATACGCACAATTTCAGGTCATTACCAATGCTGTGTGTCAGAAG
ACCTTTGGGTCATCTGTGGTCACCAGTGGAGTTATCTGCGTGGAGTCCAT
CAACAAGAAGTCGACCTGTCAGGCGATTCTGGCGGTCCGTTGGCTTTGAA
CAATAGACTAATTGGTGTGACCTCGTTTGTGTCCTCCAAGGGATGTGAGA
AAAATGCGCTGCTGCTTCACCCGCGTCACCAGCTATCTGGATTGATCAGA
CCAGTCCGGTGTGTTTTATGCAGCTTTCTAGACAT
FMO14134.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:22:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10477-RB | 1039 | CG10477-RB | 7..822 | 10..819 | 3915 | 99.1 | Plus |
| CG10477-RA | 1361 | CG10477-RA | 7..822 | 10..819 | 3915 | 99.1 | Plus |
| yip7-RA | 904 | CG6457-RA | 139..533 | 121..515 | 475 | 75.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:22:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6033738..6034294 | 819..269 | 2490 | 98.6 | Minus |
| 3L | 28110227 | 3L | 6034346..6034605 | 269..10 | 1300 | 100 | Minus |
| 3L | 28110227 | 3L | 6035674..6035804 | 385..515 | 265 | 80.2 | Plus |
| 3L | 28110227 | 3L | 6035354..6035497 | 121..264 | 240 | 77.8 | Plus |
| 3L | 28110227 | 3L | 6050888..6051030 | 121..263 | 220 | 76.9 | Plus |
Blast to na_te.dros performed 2014-11-29 00:22:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Penelope | 4158 | Dvir\Penelope DV49102 4158bp Derived from U49102 (Rel. 69, Last updated, Version 4). | 1007..1052 | 641..596 | 113 | 71.7 | Minus |
| Penelope | 804 | Penelope 804bp Derived from AF418572 (AF418572) (Rel. 70, Last updated, Version 3). | 562..607 | 641..596 | 113 | 71.7 | Minus |
FMO14134.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:36:41 Download gff for
FMO14134.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10477-RA | 2..826 | 5..824 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:00:23 Download gff for
FMO14134.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10477-RA | 2..826 | 5..824 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:00:23 Download gff for
FMO14134.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6033734..6034293 | 270..824 | 98 | <- | Minus |
| 3L | 6034346..6034614 | 1..269 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:36:41 Download gff for
FMO14134.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6026834..6027393 | 270..824 | 98 | <- | Minus |
| arm_3L | 6027446..6027714 | 1..269 | 98 | | Minus |
