FMO14135.5prime Sequence
303 bp (303 high quality bases) assembled on 2014-07-11
> FMO14135.5prime
TCAGTCGACATGCTTCACTCAAACTATCTTTTTCTGATCGGCGGTTGCTG
CCTGGTTTTCGCTGTCTCAGCGCAGATTCCCATCACGCCGCGACGTTGCC
CGGCGAACGAGACTTTCCTGGCCTGTGGTCCCGATTGTCAAACGGAGTGC
GCCACGCTAGGAAAGCCCTGTCTGGTCAGGCACATCCGATGTCCAGATGG
ATGCTACTGCAACAAGGGCTTCGCGAGGAACGCCGCGGGCACGTGCATCC
CCCTTCGGCGGTGCAACGAAGGCGGCTACGGAAACGCAAGCTTTCTAGAC
CAT
FMO14135.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:22:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42259-RB | 486 | CG42259-RB | 31..312 | 5..285 | 1385 | 99.6 | Plus |
| CG42259-RA | 711 | CG42259-RA | 256..537 | 5..285 | 1385 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:22:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1046636..1046835 | 86..285 | 1000 | 100 | Plus |
| X | 23542271 | X | 1046485..1046560 | 10..85 | 380 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:22:49 has no hits.
FMO14135.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:36:43 Download gff for
FMO14135.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42259-RA | 251..543 | 1..293 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:00:27 Download gff for
FMO14135.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42259-RA | 251..543 | 1..293 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:00:27 Download gff for
FMO14135.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1046474..1046560 | 1..85 | 95 | -> | Plus |
| X | 1046636..1046841 | 86..293 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:36:43 Download gff for
FMO14135.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 940507..940593 | 1..85 | 95 | -> | Plus |
| arm_X | 940669..940874 | 86..293 | 98 | | Plus |
