FMO14137.5prime Sequence
1023 bp (929 high quality bases) assembled on 2014-07-11
> FMO14137.5prime
TCAGTCGACATGGAGTCCAGCAGCAGTGTCGTCGCGGAGATGGAGTCCAC
CAGTCCAAGTGATCACGGCCAGCCCACCCAGATCACCTCCATCGATGGCT
TCTTCAATCGGAAACGGGGGCGTCCGCCAAAGAATCGCTTTGTGGAGGTC
TACAAGAGCGCCCAGCACTCGCCGCAGGCCATCTTCACCAGCTTTAAGCT
GGAGAGAAGCGAATATTCCGGCCCAGGAGCACGTCTTCCCGGTGGCTCAT
CGTCAACGGTGGCCACTGCAGAGGATCGTTTGTCTCTAGCGGATCACGAT
GGATCAGCAACTGATCTCACACCTAGTCGCTACCGGAAACGGGGTCGTGT
TTGGGCCCCAACATCGTCTTTGGAGCAGCCTAGCAAGAGAATTGTCAATC
AGCCAACCCACTTTGGAGCGAGAAGTGAGACAGAGTCTCGGAGTAGCCGC
CATGAGTCTTTAGCCCAGCCCACCTTACAGCCCTCAGAGCCTTTAGAAAC
AAACTCGTCGACGAATTTATCAAGCACAATTTTGGATAAAGTTTCAGTTG
TTCGAGCGGCGGGAACTTTTTATCCGGAGAATGCGAATTCAGCTGCCCAA
GGGGAAACGCCGGAAGTGGTTAGTTCGAGATACAATAGTCGCCAGGAGTC
GAACGACTTGGAGGTGGACCAGCCGGAGGATCTGAGCATGCGACCATCTC
TGCCGGAAGCCACTGCCACACCGGCGGTAGTGGGACCAGCTCTGATATGA
ATCTGTTGCAGTTTAAGCAGCTGATCGATTTGTACCAGCGACAGGTGCTG
TTGCCCAGCTTTCTGGCGGCAGCCAGTCAACCGTTGGCATTACCGGGTTC
AGCAGCAGGTCCTGGAGTTTCAGGCCTCTTCTGGACATGCGCATTTTGCT
TGAAGATGGCCGCTCAACAGAAGCTAATGCTGCTCCAATGCAGCCGCAAG
TGCAACGGCAGTTGCAGTGGCAGCCCCACCAATCACTTCTCGGTCGAAGA
ATGGTGGCGAACGATACCGGGAG
FMO14137.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:23:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7512-RB | 1958 | CG7512-RB | 194..1207 | 9..1022 | 4710 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:23:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11517607..11518046 | 546..985 | 1920 | 97.7 | Plus |
| 3L | 28110227 | 3L | 11517095..11517403 | 160..468 | 1545 | 100 | Plus |
| 3L | 28110227 | 3L | 11514863..11515014 | 9..160 | 760 | 100 | Plus |
| 3L | 28110227 | 3L | 11517471..11517552 | 466..547 | 410 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:23:36 has no hits.
FMO14137.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:37:00 Download gff for
FMO14137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7512-RB | 188..1179 | 1..995 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:01:28 Download gff for
FMO14137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7512-RB | 188..1179 | 1..995 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:01:28 Download gff for
FMO14137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11514857..11515013 | 1..159 | 97 | -> | Plus |
| 3L | 11517095..11517403 | 160..468 | 100 | -> | Plus |
| 3L | 11517474..11517552 | 469..547 | 100 | -> | Plus |
| 3L | 11517609..11518055 | 548..995 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:37:00 Download gff for
FMO14137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11507957..11508113 | 1..159 | 97 | -> | Plus |
| arm_3L | 11510195..11510503 | 160..468 | 100 | -> | Plus |
| arm_3L | 11510574..11510652 | 469..547 | 100 | -> | Plus |
| arm_3L | 11510709..11511155 | 548..995 | 97 | | Plus |
