FMO14148.5prime Sequence
1042 bp (938 high quality bases) assembled on 2014-07-11
> FMO14148.5prime
TCAGTCGACATGGATTTTCGAGAGCTAGATAAATTAAACTGGCGTTTGCA
TCTGAGTAACAATAACAATATCGTTAATTATAGTGCGAACCGACACCTCG
GTCCTGATGCGGCTGAAGAGCGACGCCCGGAGCTCTTAGTCAGCCAAGTC
AATTGTGGGACCGGTGTAAATACAATGGGCACAAATCAAAAACGAGCAGC
AACAACATCAGCGCAGGCCGTAGCGGTGGACGAGCAGGTCGTGGGAGCCG
TGGGTGGTGGCGGGGCAAAGGCAGAGGAGTGCCCTGCAGCGACCATGGCC
GCAGAGGATGGTGATAAGGTGGAAAGTCCTTCTTACTGCGAACTGGATCT
GGACGTGGCAAGCTACGGGCTAGCAGCAGCTGCCCTCTCATCCTTTGAAG
CCGCCGCCTGTGGCTATAATTCCAGCCGAACTTCCATAAACAACTCAACC
GAAAACCTGAGCTATGCCAGTGACAATATTTACGGCGACGATATAATTTT
GCTGGACGACAACGACATGAACGCGGAGGAGATATCTATCAACTCCGACG
ACTGCGTCTACGCTTACCGTGGTGAAGGGGCTGATTTTGACATGAACATG
GATATCATCGCCACGGGAAGGGTTGGCGGGCAACACTTCGACCTTGGCCG
AGGACCAGTGAATGCTATGGGAGGCGATAGCCTCATTTACGGCGAAGATG
AGACGGAGTTTCTTGAAATGGACTTTGAGCCAGACCCCTCATCAGAGTTG
GAGCTTGTTGGCGGACCACCGATATGACCATCCAGCCTCAGCCAATTTGT
TGTTAATGCAACGCGACTATAGCCAAATGAACAGCATAGCGGAACTACTT
CTACGCAGAAGGAAAGCTGCACAGCTCGCCCATTAGAATGATTTTCCGCA
GGAGACCTAATGCAGCAGCAAAGCTACGCCTTAGTAAGAGTCGCGCGCAT
CAGCTTGAATTTGATAAAATCAAAGACGTTGGTGCTGCTGAATGCCGTGA
CATAAATTTATGAGCTAAAGTATATTGTTGGGAAACAGCCTG
FMO14148.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:23:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3651-RD | 4020 | CG3651-RD | 33..1053 | 10..1018 | 4680 | 98.1 | Plus |
| CG3651-RC | 2526 | CG3651-RC | 33..1053 | 10..1018 | 4680 | 98.1 | Plus |
| CG3651-RB | 2527 | CG3651-RB | 76..1023 | 83..1018 | 4315 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:23:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 22122248..22122926 | 316..987 | 2880 | 97.9 | Plus |
| 2L | 23513712 | 2L | 22121872..22122181 | 10..319 | 1550 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:23:32 has no hits.
FMO14148.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:36:59 Download gff for
FMO14148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3651-RC | 24..1037 | 1..1004 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:01:25 Download gff for
FMO14148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3651-RC | 24..1037 | 1..1004 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:01:25 Download gff for
FMO14148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 22121863..22122180 | 1..318 | 98 | -> | Plus |
| 2L | 22122251..22122926 | 319..987 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:36:59 Download gff for
FMO14148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 22121863..22122180 | 1..318 | 98 | -> | Plus |
| arm_2L | 22122251..22122926 | 319..987 | 98 | -> | Plus |
