FMO14150.5prime Sequence
976 bp (878 high quality bases) assembled on 2014-07-11
> FMO14150.5prime
TCAGTCGACATGTCAGACACTAAATCCGAAATTGAGGGCTTTATAGCCAT
TCCCACGACATCGGGCGAACAACAACAACAACAGCCGCAACAGCAGCAAA
ATGAGCAACAAGTGGTCGGCACAAAGGACATTAAAGCTCCTGATCAGGCA
AGGACAATTGTGGATCCTCCGACGCCCTCGGCTGAGTCCTGCAACTCCTT
CGATATCTTTGAGCCACCTGCCACGCCCCTGGATTCCATTAGCCTCAAGA
GCAGTGCCAGTAGTTACCTCTACGATCGTGATATTACAGCTAAGAAACAG
AATGGAGCTGCCATACGCACAAATAGCCTGGGTTCGGGCACTAGGACGCC
ACCTTTGGAAAGGAAGAGCAAACTCAGTGCCCTGGGCAGATTCTTTAAGC
CCTGGAAATGGCGACGGAAAAAGAAGAGCGAGAAGTTCGAGGCGGCCTCC
AAATCCCTGGAGCGTAAGATTTCTGTGCGTGCCAATCGTGATGAGCTAGT
GCAAAAGGGGATTCTAATGCCTGAGAGTCCCCTGGGCAATATTCCAGAAC
CAGGCGAGGAGTCGTATTATAACAACAGCAATAGTGGAGCCACCGCGAAT
GGATCCCTGCTCAACTCAGCCGTCCACAATAATTCCATGAGCCAGGCCAA
TAATTCCATAAATGCCACCACCGGCAATCCGCTCATCTCCGCCGCCCAGC
AGCAGCTGAACCAGGGACTTCCCAACTCGATCTCCGTGCAGCAGTTCAAC
GGTCAGACCAGATCCACAGAATTTCCATGGCCAATGGCCTAGTGGTGCGG
CGGCGGCGTGAGACGGTTCTCGGACACGTCTTCCCTCAGCGGCGCGTTCG
CACTCGCAGTCGCGCCCAGCAACTGGGGGGTGGGGCACACCACCACCCTA
TACCACTGGTCAGCACCACAGGGCTGGCCAGCAGCTGCGCACGAATCGCC
TCGCACATACGACGAAAGACAGACTG
FMO14150.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:24:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32264-RK | 5535 | CG32264-RK | 501..1460 | 10..950 | 4200 | 97.3 | Plus |
| CG32264-RM | 3767 | CG32264-RM | 1402..2083 | 288..950 | 2810 | 96.2 | Plus |
| CG32264-RL | 2798 | CG32264-RL | 433..1114 | 288..950 | 2810 | 96.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:24:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3767272..3767571 | 844..551 | 1145 | 96.7 | Minus |
| 3L | 28110227 | 3L | 3769242..3769413 | 454..283 | 845 | 99.4 | Minus |
| 3L | 28110227 | 3L | 3803314..3803455 | 289..148 | 710 | 100 | Minus |
| 3L | 28110227 | 3L | 3805821..3805959 | 148..10 | 695 | 100 | Minus |
| 3L | 28110227 | 3L | 3769077..3769176 | 554..455 | 500 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-29 00:24:26 has no hits.
FMO14150.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:37:19 Download gff for
FMO14150.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32264-RK | 493..1413 | 1..909 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:02:17 Download gff for
FMO14150.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32264-RK | 493..1413 | 1..909 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:02:17 Download gff for
FMO14150.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3767200..3767568 | 554..909 | 95 | <- | Minus |
| 3L | 3769078..3769176 | 455..553 | 100 | <- | Minus |
| 3L | 3769242..3769406 | 290..454 | 100 | <- | Minus |
| 3L | 3803314..3803454 | 149..289 | 100 | <- | Minus |
| 3L | 3805821..3805965 | 1..148 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:37:19 Download gff for
FMO14150.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3767200..3767568 | 554..909 | 95 | <- | Minus |
| arm_3L | 3769078..3769176 | 455..553 | 100 | <- | Minus |
| arm_3L | 3769242..3769406 | 290..454 | 100 | <- | Minus |
| arm_3L | 3803314..3803454 | 149..289 | 100 | <- | Minus |
| arm_3L | 3805821..3805965 | 1..148 | 97 | | Minus |
