FMO14151.5prime Sequence
1000 bp (890 high quality bases) assembled on 2014-07-11
> FMO14151.5prime
TCAGTCGACATGGGCACCAATTCGGGAGCCACCGCTGGCATAAACAACAA
GCCGGTTGGCGGTGCAACAGGAGCCGGCGTCCTTGTAGGCGGCGGTGTGG
GCGGTGCCAATTCCTCGATCGGCGGTGTCCTGTCGAACAGCCTGGGCGGT
GGCGGCAGCGGCGGTCTGAGCATCAGCGGCCTCAACGCTGGTGGACAGAA
CGCCAATGTGGGCGGAATGGGCAACGTTGGCGGCGACGACGGCGGAAACG
GGATGGTGGGCGGCGGTGTAAATAACCAGCAGGCCACAACGCCCCAATAC
ACAATACCGGGCATCTTGCACTTCATCCAGCACGAGTGGTCGCGCTTCGA
GCTGGAGCGATCACAGTGGGACGTGGACAGGGCCGAATTGCAGGCTCGCA
TTGCTATGCTGCTTGGAGAGCGCAAGTGCTTGGAAAGCCTCAAATCGGAT
TTGACGCGCCGCATCAAGATGCTGGAGTACGCACTGCGCCAGGAGCGTGC
GAAATTCTATCGTTTAAAATACGGCACCGATCCGCCGCAGCTCAATGAGT
TCAAGCCATCGAACGAGGATGCCGGACTGGCCGGTGAGGTGGCCACTGAC
TCGGAGGTGCCCTACAGCAGTGTCTCGAACACTACGTGGCGGCAGGGGCG
TCAGATGCTGCGACAGTATCTGGCCGAGATTGGCTACACAGACAACATCA
TCGATGTGCGTTCAAATCGGGTGCGTTCGATCCTTGGCCTAAACAATAAT
GCCGAGCACGACGGCAGCGGCGGAGACTGGGTGGTGGACTTGGCGGCGGC
ACCGGCGGCGAGAACCTTAGCCCAAACATCAATGGAACGAGAGCAACAAA
CGCGCATCGGAGACGGAAGCGTCATACTCCCGCTAAAAAGTGCCACAAAT
CGATCGATGAAATAATCCTGGACCCGAAGCGCTGTGTAGGGGGAACTTTG
AGTTTCCGGGGCGCCCACCCAAAAGTCCGACACACAACAAAATTCTGACG
FMO14151.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:24:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cka-RF | 5366 | CG7392-RF | 498..1472 | 10..981 | 4495 | 98 | Plus |
| Cka-RE | 2819 | CG7392-RE | 318..1292 | 10..981 | 4495 | 98 | Plus |
| Cka-RC | 3254 | CG7392-RC | 765..1739 | 10..981 | 4495 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:24:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8035817..8036298 | 390..869 | 2310 | 99.6 | Plus |
| 2L | 23513712 | 2L | 8032258..8032642 | 10..394 | 1925 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:24:30 has no hits.
FMO14151.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:37:21 Download gff for
FMO14151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cka-RC | 765..1727 | 10..969 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:02:23 Download gff for
FMO14151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cka-RC | 765..1727 | 10..969 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:02:23 Download gff for
FMO14151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8032258..8032641 | 10..393 | 100 | -> | Plus |
| 2L | 8035821..8036298 | 394..869 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:37:21 Download gff for
FMO14151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8032258..8032641 | 10..393 | 100 | -> | Plus |
| arm_2L | 8035821..8036298 | 394..869 | 99 | -> | Plus |
