FMO14153.5prime Sequence
1001 bp (914 high quality bases) assembled on 2014-07-11
> FMO14153.5prime
TCAGTCGACATGAAACCCGTTTCACAAAGTCAAGCCGCATACTCCAGTCC
ACACCTGGTTGAACCTGGCGTAGCGAAGTCCACGAGTCCGCACATTATGA
CACAGCAACAGCCGCCGTGGCCAAGTCCCATTTCCAGCTCCAGTTCCAAT
CCCAGGGGAAAATGCTGGCTCATCCTCGTACTTATGGCTGTGCTCCCACT
GGTGGCAGATGTTGGAGCCCTGCCCTTCCTGTTCACGCACATCAAGCCGC
AGATCAACTGGACGCAGCCGGAGATGGAGAGCTGGGTAATTGAGGAGCAG
CCGCGCAGCATCGAGCCCCACCTGGAGCCAGTGCTCCATCCGAATCGCAC
GCACCGCGCTCTGTCTTCGGACAGCACGGATGCGGAGTTCCTGCAGAGGT
TGGTCAGCATCAGGCACAACCAGACGGCCAGTTCCAGGATGCTGTGGTAC
GACGTGGCCGGCGGAGATGGGCTGGTGTACCCACCGTTCGTGGACAAGGC
CCTCAAGCTGCTGAACCTCAAGCAGGTGGCCTTTGAGATCGAAAACAGCG
TGATGTCCAAGGTGACCTGCACCGCCTGCAGAGCGGGAGCCGGGATGCTG
CAGCATCAGATCCAGTCGGGCAAGACGGATGCGGAGCTCATTCGCATGAT
CACGGACTACTGCACCAATCTGAACATCCAGAGTGCCCGGGTCTGCCAGG
GCGTAGCCCAACTCTTCGGCAGCGAGCTGATATACGTGCTGAAGAGGGTC
AATCTGAGTCCTGATGAACTCTGCAGCTTTGTGATTGGCGATGGGTTGTG
CGGACGTGTACATCCCTATCACGAGTGGGAGGTCATATTCCCACCAGTGC
CCAAGCCACCTCGCCTCCCAGATCTGCCATTCCCATGGAGGAGGGCTCCC
TTCTTTCAGGTCCTGCCACATTTCCGATAACCACTTACGATCCCACCTAC
CGGAGGGATCAATGGCGAACTGCCATTGATCGCCTTGCTGGCGACTTGAA
A
FMO14153.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:24:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3376-RC | 2880 | CG3376-RC | 498..1483 | 10..996 | 4520 | 97.8 | Plus |
| CG3376-RD | 3086 | CG3376-RD | 464..1430 | 29..996 | 4425 | 97.7 | Plus |
| CG3376-RB | 3522 | CG3376-RB | 464..1430 | 29..996 | 4425 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-29 00:24:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24262163..24262947 | 211..996 | 3340 | 97 | Plus |
| 2R | 25286936 | 2R | 24261926..24262108 | 29..211 | 915 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-29 00:24:38 has no hits.
FMO14153.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-11 10:37:25 Download gff for
FMO14153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3376-RC | 498..1460 | 10..973 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 01:02:31 Download gff for
FMO14153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3376-RC | 498..1460 | 10..973 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 01:02:31 Download gff for
FMO14153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24261926..24262108 | 29..211 | 100 | -> | Plus |
| 2R | 24261831..24261849 | 10..28 | 100 | -> | Plus |
| 2R | 24262164..24262924 | 212..973 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-11 10:37:25 Download gff for
FMO14153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20149449..20149631 | 29..211 | 100 | -> | Plus |
| arm_2R | 20149354..20149372 | 10..28 | 100 | -> | Plus |
| arm_2R | 20149687..20150447 | 212..973 | 97 | | Plus |
